RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 LRRC4Q9HBW1 653 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 HCFC1R1Q9NWW0 138 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 IP6K2Q9UHH9 426 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 CYTH4Q9UIA0 394 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 AMFRQ9UKV5 643 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 SSX2IPQ9Y2D8 614 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 TSC2P49815 1807 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 SIGLEC16A6NMB1 481 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 E5RJQ4 531 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 K7ESF4 209 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 CLDN5O00501 218 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 SART1O43290 800 aaKnown RBP15.13■□□□□ 0.01
SHMT2-208ENST00000553868 FBXO21O94952 628 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 ERBB2P04626 1255 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 KRT3P12035 628 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 TCP1P17987 556 aaKnown RBP15.13■□□□□ 0.01
SHMT2-208ENST00000553868 SLC1A1P43005 524 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 RPL34P49207 117 aaKnown RBP15.13■□□□□ 0.01
SHMT2-208ENST00000553868 RGS7P49802 495 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 MESDQ14696 234 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 CYP4A22Q5TCH4 519 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 OR6B2Q6IFH4 312 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 KIAA1211LQ6NV74 962 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 PMF1Q6P1K2 205 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 PAQR9Q6ZVX9 377 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 XYLT1Q86Y38 959 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 NPAS3Q8IXF0 933 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 GPR65Q8IYL9 337 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 C2orf15Q8WU43 125 aaKnown RBP15.13■□□□□ 0.01
SHMT2-208ENST00000553868 PIK3R5Q8WYR1 880 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 MCRS1Q96EZ8 462 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 ABCB6Q9NP58 842 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 PNPLA8Q9NP80 782 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 DMAP1Q9NPF5 467 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-208ENST00000553868 PCDHB5Q9Y5E4 795 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 BACE2Q9Y5Z0 518 aa15.13■□□□□ 0.01
SHMT2-208ENST00000553868 SPAG17Q6Q759 2223 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 TCRBV5S1A1TA0A578 114 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 MIF4GDA9UHW6 222 aaKnown RBP15.12■□□□□ 0.01
SHMT2-208ENST00000553868 GOLGA8SH3BPF8 625 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 FTCDO95954 541 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 CPB1P15086 417 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 PRLRP16471 622 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 MAN1A1P33908 653 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 MAP3K7CLP57077 242 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 CREMQ03060 361 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 GRM2Q14416 872 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 RPS6KA1Q15418 735 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 CFAP221Q4G0U5 840 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 SLC39A12Q504Y0 691 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 C2CD6Q53TS8 623 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 FAM102AQ5T9C2 384 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-208ENST00000553868 MEI1Q5TIA1 1274 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 PAPD7Q5XG87 772 aaKnown RBP15.12■□□□□ 0.01
SHMT2-208ENST00000553868 RNF43Q68DV7 783 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 VSTM1Q6UX27 236 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 CLEC20AQ6ZU45 233 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 PIGZQ86VD9 579 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 LONP2Q86WA8 852 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 SIX6OS1Q8N1H7 587 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 BBC3Q96PG8 261 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-208ENST00000553868 CSNK1G1Q9HCP0 422 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 CHST7Q9NS84 486 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 MTRRQ9UBK8 725 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 HYOU1Q9Y4L1 999 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 SAR1BQ9Y6B6 198 aa15.12■□□□□ 0.01
SHMT2-208ENST00000553868 TMEM191CA6NGB0 347 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 TMEM110-MUSTN1A8MSY1 372 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 NRG2O14511 850 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-208ENST00000553868 SPOPO43791 374 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 PROSCO94903 275 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 BDNFP23560 247 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 CNR2P34972 360 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 MAGEA11P43364 429 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 SLC6A3Q01959 620 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 GPR17Q13304 367 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 PIGHQ14442 188 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-208ENST00000553868 PSMD5Q16401 504 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 EFHC1Q5JVL4 640 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 RTP2Q5QGT7 225 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 PPP1R15BQ5SWA1 713 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 SH3PXD2AQ5TCZ1 1133 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 TANGO2Q6ICL3 276 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 FAM183BPQ6ZVS7 135 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 PHLDB2Q86SQ0 1253 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 NT5DC3Q86UY8 548 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 LRRTM3Q86VH5 581 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 UBL4BQ8N7F7 174 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 SPPL2BQ8TCT7 592 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 FNIP1Q8TF40 1166 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 FAM3CQ92520 227 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 MCEEQ96PE7 176 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 TMEM209Q96SK2 561 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 NCAPGQ9BPX3 1015 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 RBM12Q9NTZ6 932 aaKnown RBP15.11■□□□□ 0.01
SHMT2-208ENST00000553868 CHORDC1Q9UHD1 332 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-208ENST00000553868 SNX12Q9UMY4 172 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 ALG6Q9Y672 507 aa15.11■□□□□ 0.01
SHMT2-208ENST00000553868 TICRRQ7Z2Z1 1910 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 COL4A2P08572 1712 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms