RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 MTA1Q13330 715 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 SLC25A52Q3SY17 297 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 SLC44A4Q53GD3 710 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 C1orf228Q6PIY5 440 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 TRIM67Q6ZTA4 783 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 TPRG1Q6ZUI0 275 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 SIX5Q8N196 739 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 EMC1Q8N766 993 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 TTC8Q8TAM2 541 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 WBP2Q969T9 261 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 EXOC4Q96A65 974 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 MCEEQ96PE7 176 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 CHP1Q99653 195 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 DDX50Q9BQ39 737 aaKnown RBP14.41□□□□□ -0.1
TUBB3-202ENST00000553656 LINC00597Q9H2U6 94 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 C8orf33Q9H7E9 229 aaPredicted RBP14.41□□□□□ -0.1
TUBB3-202ENST00000553656 ECT2Q9H8V3 914 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 MRPL47Q9HD33 250 aaKnown RBP14.41□□□□□ -0.1
TUBB3-202ENST00000553656 HPS4Q9NQG7 708 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 HEBP1Q9NRV9 189 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 MYO1AQ9UBC5 1043 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 TMEM59LQ9UK28 342 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 PIAS3Q9Y6X2 628 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 STK25O00506 426 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 DLL1O00548 723 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 ATMINO43313 823 aaPredicted RBP14.4□□□□□ -0.1
TUBB3-202ENST00000553656 IPO7O95373 1038 aaKnown RBP14.4□□□□□ -0.1
TUBB3-202ENST00000553656 LATS1O95835 1130 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 MOCS2O96007 188 aaPredicted RBP14.4□□□□□ -0.1
TUBB3-202ENST00000553656 IGLV3-25P01717 112 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 IGLV3-27P01718 113 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 GLULP15104 373 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 GPD1P21695 349 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 CCR1P32246 355 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 RDXP35241 583 aaKnown RBP14.4□□□□□ -0.1
TUBB3-202ENST00000553656 GSDMDP57764 484 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 DEUP1Q05D60 604 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 Q6ZNB5 142 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 RXFP2Q8WXD0 754 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 CFAP57Q96MR6 1250 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 NPY6RQ99463 290 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 DDX23Q9BUQ8 820 aaKnown RBP14.4□□□□□ -0.1
TUBB3-202ENST00000553656 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.4□□□□□ -0.14e-7■■■□□ 18.7
TUBB3-202ENST00000553656 AGO1Q9UL18 857 aaKnown RBP14.4□□□□□ -0.1
TUBB3-202ENST00000553656 NCOR1O75376 2440 aa14.4□□□□□ -0.1
TUBB3-202ENST00000553656 KIF26AQ9ULI4 1882 aaPredicted RBP14.4□□□□□ -0.1
TUBB3-202ENST00000553656 TICRRQ7Z2Z1 1910 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 TMEM221A6NGB7 291 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 C2CD4BA6NLJ0 364 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 M0R296 226 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 MAN2B1O00754 1011 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 GREM1O60565 184 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 GJB6O95452 261 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 KLKB1P03952 638 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 CYBBP04839 570 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 CYP17A1P05093 508 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 H2AFZP0C0S5 128 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 ADH5P11766 374 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 RFC1P35251 1148 aaPredicted RBP14.39□□□□□ -0.11
TUBB3-202ENST00000553656 CYLC1P35663 651 aaPredicted RBP14.39□□□□□ -0.11
TUBB3-202ENST00000553656 MRE11P49959 708 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 MLLT6P55198 1093 aaPredicted RBP14.39□□□□□ -0.11
TUBB3-202ENST00000553656 PITX1P78337 314 aaPredicted RBP14.39□□□□□ -0.11
TUBB3-202ENST00000553656 ATP11AP98196 1134 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 MAMLD1Q13495 774 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 DHCR24Q15392 516 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 CDO1Q16878 200 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 ANO4Q32M45 955 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 ZC3H12AQ5D1E8 599 aaKnown RBP14.39□□□□□ -0.11
TUBB3-202ENST00000553656 PLEKHA7Q6IQ23 1121 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 ZNF852Q6ZMS4 543 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 H2AFVQ71UI9 128 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 RALGPS2Q86X27 583 aaPredicted RBP14.39□□□□□ -0.11
TUBB3-202ENST00000553656 DNAAF5Q86Y56 855 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 TMTC1Q8IUR5 882 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 ADGRG2Q8IZP9 1017 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 ATP6V0D2Q8N8Y2 350 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 JOSD2Q8TAC2 188 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 CTNNBL1Q8WYA6 563 aaPredicted RBP14.39□□□□□ -0.11
TUBB3-202ENST00000553656 SLC39A13Q96H72 371 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 FCRL2Q96LA5 508 aaPredicted RBP14.39□□□□□ -0.11
TUBB3-202ENST00000553656 TBCBQ99426 244 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 THAP2Q9H0W7 228 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 LUC7LQ9NQ29 371 aaKnown RBP14.39□□□□□ -0.11
TUBB3-202ENST00000553656 SPHK2Q9NRA0 654 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 SPTLC3Q9NUV7 552 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 MRPS17Q9Y2R5 130 aaKnown RBP14.39□□□□□ -0.11
TUBB3-202ENST00000553656 TTC28Q96AY4 2481 aa14.39□□□□□ -0.11
TUBB3-202ENST00000553656 TCRBV5S1A1TA0A578 114 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 TYW5A2RUC4 315 aaKnown RBP14.38□□□□□ -0.11
TUBB3-202ENST00000553656 SPECC1L-ADORA2AF8WAN1 911 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 ACSL4O60488 711 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 CTHP32929 405 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 PTPN9P43378 593 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 GAD2Q05329 585 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 PPP2R5DQ14738 602 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 SPA17Q15506 151 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 ASTE1Q2TB18 679 aaPredicted RBP14.38□□□□□ -0.11
TUBB3-202ENST00000553656 BRMS1LQ5PSV4 323 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 LY6G5CQ5SRR4 150 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms