RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TAF6P49848 677 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 AIF1P55008 147 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 NAB1Q13506 487 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 PRKD1Q15139 912 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-205ENST00000553474 SLC25A52Q3SY17 297 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 PPP6R3Q5H9R7 873 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-205ENST00000553474 ZNF449Q6P9G9 518 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 CEP57Q86XR8 500 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 SH3TC2Q8TF17 1288 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 KBTBD7Q8WVZ9 684 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 TRIB2Q92519 343 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 CSPG4P5Q96PW8 444 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 EBNA1BP2Q99848 306 aaKnown RBP13.36□□□□□ -0.27
SHMT2-205ENST00000553474 NAT9Q9BTE0 207 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 TUBGCP4Q9UGJ1 667 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 ZFP69BQ9UJL9 534 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 PIK3R2O00459 728 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 SMIM10L2AP0DMW4 78 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 SMIM10L2BP0DMW5 78 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 FAAP100Q0VG06 881 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 CA9Q16790 459 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 STXBP5Q5T5C0 1151 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 FAM91A1Q658Y4 838 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 ATG16L1Q676U5 607 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 TIFABQ6ZNK6 161 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 TMEM130Q8N3G9 435 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 NME8Q8N427 588 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 OLFM3Q96PB7 478 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 HNRNPABQ99729 332 aaKnown RBP13.35□□□□□ -0.27
SHMT2-205ENST00000553474 EIF2AQ9BY44 585 aaKnown RBP13.35□□□□□ -0.27
SHMT2-205ENST00000553474 DHX35Q9H5Z1 703 aaKnown RBP13.35□□□□□ -0.27
SHMT2-205ENST00000553474 PTCH2Q9Y6C5 1203 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 SMIM28A0A1B0GU29 152 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 FAM159BA6NKW6 160 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 PPP1R12AO14974 1030 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-205ENST00000553474 HUS1O60921 280 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 DAB1O75553 588 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 GABBR2O75899 941 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 DGKIO75912 1065 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 CYP2C9P11712 490 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 KCNA4P22459 653 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 WARSP23381 471 aaKnown RBP13.35□□□□□ -0.27
SHMT2-205ENST00000553474 RAB6CQ53S08 254 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 KCNT2Q6UVM3 1135 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 CTAGE3PQ8IX95 158 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 PPM1NQ8N819 430 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 C7orf31Q8N865 590 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 ACMSDQ8TDX5 336 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 TFB1MQ8WVM0 346 aaKnown RBP13.35□□□□□ -0.27
SHMT2-205ENST00000553474 HTR3CQ8WXA8 447 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 KCTD13Q8WZ19 329 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 NT5C3BQ969T7 300 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 CFAP36Q96G28 342 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 SERAC1Q96JX3 654 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 SIGLEC10Q96LC7 697 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 C7orf26Q96N11 449 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 SRPK1Q96SB4 655 aaKnown RBP13.35□□□□□ -0.27
SHMT2-205ENST00000553474 SLC9A7Q96T83 725 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 RAB6CQ9H0N0 254 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 TLE6Q9H808 572 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 NPHS2Q9NP85 383 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 GPATCH2LQ9NWQ4 482 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 MTMR10Q9NXD2 777 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 NOP53Q9NZM5 478 aaKnown RBP13.35□□□□□ -0.27
SHMT2-205ENST00000553474 SLC17A7Q9P2U7 560 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 STAP1Q9ULZ2 295 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 NME7Q9Y5B8 376 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 PCDHA11Q9Y5I1 949 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 RAD54BQ9Y620 910 aa13.35□□□□□ -0.27
SHMT2-205ENST00000553474 A0A0A0MRY4 1105 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 TRIM49D1C9J1S8 452 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 E7ENQ6 273 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 PPEF2O14830 753 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 BIRC5O15392 142 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 OPHN1O60890 802 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 ALDH1A2O94788 518 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 PYGBP11216 843 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 FGFR1P11362 822 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 PTPN4P29074 926 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 NOS2P35228 1153 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 SERPINB4P48594 390 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 ADAM17P78536 824 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 TRIM32Q13049 653 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 PRAMEF19Q5SWL8 479 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 STEAP4Q687X5 459 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 OLFML2BQ68BL8 750 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 BNIPLQ7Z465 357 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 CLNKQ7Z7G1 428 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 TAB3Q8N5C8 712 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-205ENST00000553474 CCDC110Q8TBZ0 833 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 TTC17Q96AE7 1141 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 C18orf25Q96B23 403 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-205ENST00000553474 SPATA13Q96N96 652 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 OSMRQ99650 979 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 SIKE1Q9BRV8 207 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 DUSP16Q9BY84 665 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 B3GNT5Q9BYG0 378 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 FAM49AQ9H0Q0 323 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-205ENST00000553474 NXF3Q9H4D5 531 aaKnown RBP13.34□□□□□ -0.27
SHMT2-205ENST00000553474 FZD10Q9ULW2 581 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms