RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 RAB21Q9UL25 225 aa18.26■□□□□ 0.51
PSEN1-206ENST00000553447 HIDE1A8MVS5 230 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 I6L893 689 aaPredicted RBP18.25■□□□□ 0.51
PSEN1-206ENST00000553447 GRM6O15303 877 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 MSI1O43347 362 aaKnown RBP18.25■□□□□ 0.51
PSEN1-206ENST00000553447 HEXIM1O94992 359 aaKnown RBP18.25■□□□□ 0.51
PSEN1-206ENST00000553447 TUBBP07437 444 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 SPATA31D3P0C874 917 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 KLRC2P26717 231 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 PTGIRP43119 386 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 ERVK-21P61565 698 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 DYNLT1P63172 113 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 DR1Q01658 176 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 SNX1Q13596 522 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 BRMS1LQ5PSV4 323 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 SNX30Q5VWJ9 437 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 WDR93Q6P2C0 686 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 SPATA31D4Q6ZUB0 917 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 PYROXD2Q8N2H3 581 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 TTC13Q8NBP0 860 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 PCDH19Q8TAB3 1148 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.25■□□□□ 0.51
PSEN1-206ENST00000553447 ANKRD7Q92527 254 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 RNF34Q969K3 372 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 TKTL2Q9H0I9 626 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 ARHGEF38Q9NXL2 777 aa18.25■□□□□ 0.51
PSEN1-206ENST00000553447 RCOR3Q9P2K3 495 aaPredicted RBP18.25■□□□□ 0.51
PSEN1-206ENST00000553447 YBX2Q9Y2T7 364 aaKnown RBP18.25■□□□□ 0.51
PSEN1-206ENST00000553447 FAM187AA6NFU0 413 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 H3BRJ5 948 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 TTI1O43156 1089 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 LPXNO60711 386 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 CSPG5O95196 566 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 ARL4AP40617 200 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 KCNJ1P48048 391 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 EFEMP1Q12805 493 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 NNTQ13423 1086 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 PPP2R5DQ14738 602 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 TAF12Q16514 161 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 SLC9A4Q6AI14 798 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 DRICH1Q6PGQ1 229 aaPredicted RBP18.24■□□□□ 0.51
PSEN1-206ENST00000553447 CCDC149Q6ZUS6 474 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 DNAJB7Q7Z6W7 309 aaPredicted RBP18.24■□□□□ 0.51
PSEN1-206ENST00000553447 ZNF276Q8N554 614 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 PQLC3Q8N755 202 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 PSMG2Q969U7 264 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 HAUS1Q96CS2 278 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 CSPG4P5Q96PW8 444 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 GDF15Q99988 308 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 FAM118BQ9BPY3 351 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 FRMD8P1Q9BZ68 369 aaPredicted RBP18.24■□□□□ 0.51
PSEN1-206ENST00000553447 PLEKHA4Q9H4M7 779 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 CWC15Q9P013 229 aaKnown RBP18.24■□□□□ 0.51
PSEN1-206ENST00000553447 TLR6Q9Y2C9 796 aa18.24■□□□□ 0.51
PSEN1-206ENST00000553447 APOC4-APOC2K7ER74 178 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 APOL1O14791 398 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 LIASO43766 372 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 TLR5O60602 858 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 GLUD1P00367 558 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 APOC2P02655 101 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 GOT1P17174 413 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 MCM3P25205 808 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 CCR1P32246 355 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 VSNL1P62760 191 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 OTUD4Q01804 1114 aaKnown RBP18.23■□□□□ 0.51
PSEN1-206ENST00000553447 SEMA3BQ13214 749 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 CAMK1Q14012 370 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 C10orf120Q5SQS8 335 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 ITIH5Q86UX2 942 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 JAMLQ86YT9 394 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 CCDC105Q8IYK2 499 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 KREMEN2Q8NCW0 462 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 SLCO2A1Q92959 643 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 ZNF512Q96ME7 567 aaPredicted RBP18.23■□□□□ 0.51
PSEN1-206ENST00000553447 CDK5RAP1Q96SZ6 601 aaKnown RBP18.23■□□□□ 0.51
PSEN1-206ENST00000553447 TRPM5Q9NZQ8 1165 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 UXTQ9UBK9 157 aaPredicted RBP18.23■□□□□ 0.51
PSEN1-206ENST00000553447 ASB3Q9Y575 518 aa18.23■□□□□ 0.51
PSEN1-206ENST00000553447 ZNF840PA6NDX5 716 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 BHMG1C9JSJ3 638 aaPredicted RBP18.22■□□□□ 0.51
PSEN1-206ENST00000553447 H3BNC9 293 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 ZMYND10O75800 440 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 TBX18O95935 607 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 C8AP07357 584 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 H2AFXP16104 143 aaPredicted RBP18.22■□□□□ 0.51
PSEN1-206ENST00000553447 PECAM1P16284 738 aaPredicted RBP18.22■□□□□ 0.51
PSEN1-206ENST00000553447 ZFXP17010 805 aaPredicted RBP18.22■□□□□ 0.51
PSEN1-206ENST00000553447 TGM2P21980 687 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 IRS1P35568 1242 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 PBX2P40425 430 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 PPP3CCP48454 512 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 ZNF135P52742 658 aaPredicted RBP18.22■□□□□ 0.51
PSEN1-206ENST00000553447 TBX4P57082 545 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 GUCY2DQ02846 1103 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 GPM6BQ13491 265 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 TRIP4Q15650 581 aaPredicted RBP18.22■□□□□ 0.51
PSEN1-206ENST00000553447 TADA2BQ86TJ2 420 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 ATL2Q8NHH9 583 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 SLC35B2Q8TB61 432 aa18.22■□□□□ 0.51
PSEN1-206ENST00000553447 ACTL9Q8TC94 416 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms