RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 CYLC1P35663 651 aaPredicted RBP15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 MAGEA1P43355 309 aa15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 CXCR3P49682 368 aa15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 ATXN1P54253 815 aaKnown RBP15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 COG7P83436 770 aa15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 C15orf59Q2T9L4 293 aaPredicted RBP15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 C10orf76Q5T2E6 689 aa15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 DDX42Q86XP3 938 aaKnown RBP eCLIP15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 RNF135Q8IUD6 432 aa15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 FAM217AQ8IXS0 508 aa15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 GJD3Q8N144 294 aa15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 DEPDC1BQ8WUY9 529 aa15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 PLD4Q96BZ4 506 aa15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 SERPINB11Q96P15 392 aa15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 SCINQ9Y6U3 715 aa15.46■□□□□ 0.07
MTHFD1-204ENST00000553405 A0A0U1RQJ8 604 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 M0QYT0 321 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 SCAMP3O14828 347 aaKnown RBP15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 PJA2O43164 708 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 CCP110O43303 1012 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 NARSO43776 548 aaKnown RBP15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 GPD1P21695 349 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 SULT1E1P49888 294 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 HDAC4P56524 1084 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 TBX4P57082 545 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 GRM2Q14416 872 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 ZC3H12AQ5D1E8 599 aaKnown RBP15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 BBS7Q8IWZ6 715 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 CCDC112Q8NEF3 446 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 ATRIPQ8WXE1 791 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 CHFRQ96EP1 664 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 ZFYVE19Q96K21 471 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 DESI2Q9BSY9 194 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 CNPY3Q9BT09 278 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 NUP85Q9BW27 656 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 LACRTQ9GZZ8 138 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 NACA2Q9H009 215 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 LINC00597Q9H2U6 94 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 FAM204AQ9H8W3 233 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 HPS4Q9NQG7 708 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 DDIT4Q9NX09 232 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 UVRAGQ9P2Y5 699 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 MYO1AQ9UBC5 1043 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 SALL4Q9UJQ4 1053 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 AGO1Q9UL18 857 aaKnown RBP15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 STAP1Q9ULZ2 295 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 ADGRG1Q9Y653 693 aa15.45■□□□□ 0.06
MTHFD1-204ENST00000553405 OTOL1A6NHN0 477 aaPredicted RBP15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 SHISA7A6NL88 538 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 CHADO15335 359 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 ARHGAP6O43182 974 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 HMBSP08397 361 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 IRF1P10914 325 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 SDC4P31431 198 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 KPNA1P52294 538 aaPredicted RBP15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 TDGQ13569 410 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 PPP2R5DQ14738 602 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 GAB4Q2WGN9 574 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 EML3Q32P44 896 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 FAM133BQ5BKY9 247 aaKnown RBP15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 IER5LQ5T953 404 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 NADSYN1Q6IA69 706 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 CYP4V2Q6ZWL3 525 aaPredicted RBP15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 STRADAQ7RTN6 431 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 CPNE8Q86YQ8 564 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 OSCP1Q8WVF1 389 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 CTNNBL1Q8WYA6 563 aaPredicted RBP15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 RFFLQ8WZ73 363 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 AZIN2Q96A70 460 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 MRPL47Q9HD33 250 aaKnown RBP15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 OSGEPQ9NPF4 335 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 SLC2A4RGQ9NR83 387 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 ARHGEF38Q9NXL2 777 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 XPO7Q9UIA9 1087 aaKnown RBP15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 WNT6Q9Y6F9 365 aa15.44■□□□□ 0.06
MTHFD1-204ENST00000553405 LATS1O95835 1130 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 CORO1AP31146 461 aaKnown RBP15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 VAV2P52735 878 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 HADHBP55084 474 aaKnown RBP15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 ATP11AP98196 1134 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 ARHGAP29Q52LW3 1261 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 NUGGCQ68CJ6 796 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 RNF43Q68DV7 783 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 TRIM68Q6AZZ1 485 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 DCUN1D2Q6PH85 259 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 NIPA2Q8N8Q9 360 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 SLC35G2Q8TBE7 412 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 ZNF564Q8TBZ8 553 aaPredicted RBP15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 FAM172AQ8WUF8 416 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 MYEOVQ96EZ4 313 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 BTBD6Q96KE9 485 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 PRMT1Q99873 361 aaKnown RBP15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 TRMT61BQ9BVS5 477 aaKnown RBP15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 TRPV5Q9NQA5 729 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 DUSP12Q9UNI6 340 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 TICRRQ7Z2Z1 1910 aa15.43■□□□□ 0.06
MTHFD1-204ENST00000553405 F5P12259 2224 aa15.42■□□□□ 0.06
MTHFD1-204ENST00000553405 A0A0A6YYK5 440 aaPredicted RBP15.42■□□□□ 0.06
MTHFD1-204ENST00000553405 BTNL10A8MVZ5 291 aa15.42■□□□□ 0.06
MTHFD1-204ENST00000553405 F9P00740 461 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms