RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 MFAP3P55082 362 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 NCKAP1LP55160 1127 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 CAMK2GQ13555 558 aaPredicted RBP13.15□□□□□ -0.3
SNRPF-204ENST00000552085 SERPINA13PQ6UXR4 307 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 NT5DC4Q86YG4 428 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
SNRPF-204ENST00000552085 SNX29Q8TEQ0 813 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 KCNN1Q92952 543 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 FBXO32Q969P5 355 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 PCED1BQ96HM7 432 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 NACA2Q9H009 215 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 ERVMER34-1Q9H9K5 563 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 TJP2Q9UDY2 1190 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 CHORDC1Q9UHD1 332 aaPredicted RBP13.15□□□□□ -0.3
SNRPF-204ENST00000552085 ITPR2Q14571 2701 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 LRRK1Q38SD2 2015 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 TRIM38O00635 465 aa13.14□□□□□ -0.31
SNRPF-204ENST00000552085 GJB6O95452 261 aa13.14□□□□□ -0.31
SNRPF-204ENST00000552085 LMO2P25791 158 aa13.14□□□□□ -0.31
SNRPF-204ENST00000552085 NXPH1P58417 271 aa13.14□□□□□ -0.31
SNRPF-204ENST00000552085 ZNF211Q13398 564 aaPredicted RBP13.14□□□□□ -0.31
SNRPF-204ENST00000552085 SKIDA1Q1XH10 827 aa13.14□□□□□ -0.31
SNRPF-204ENST00000552085 SOWAHAQ2M3V2 549 aa13.14□□□□□ -0.31
SNRPF-204ENST00000552085 SNX30Q5VWJ9 437 aa13.14□□□□□ -0.31
SNRPF-204ENST00000552085 SLC39A4Q6P5W5 647 aa13.14□□□□□ -0.31
SNRPF-204ENST00000552085 LRRC52Q8N7C0 313 aa13.14□□□□□ -0.31
SNRPF-204ENST00000552085 PHF12Q96QT6 1004 aa13.14□□□□□ -0.31
SNRPF-204ENST00000552085 ELOVL2Q9NXB9 296 aa13.14□□□□□ -0.31
SNRPF-204ENST00000552085 NBASA2RRP1 2371 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 TDRD6O60522 2096 aaKnown RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 ZFC3H1O60293 1989 aaKnown RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 A0A1W2PNU3 283 aaPredicted RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 TLR4O00206 839 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 CYP26A1O43174 497 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 RTN3O95197 1032 aaPredicted RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 DNTTP04053 509 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 PLCG1P19174 1290 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 DUSP3P51452 185 aaPredicted RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 CACNA2D1P54289 1103 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 RPS14P62263 151 aaKnown RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 POU5F1Q01860 360 aaKnown RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 ZBTB16Q05516 673 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 TRIM29Q14134 588 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 EIF4HQ15056 248 aaKnown RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 NUP93Q8N1F7 819 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 C1orf127Q8N9H9 656 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 ZNF564Q8TBZ8 553 aaPredicted RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 HPS3Q969F9 1004 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 PRR11Q96HE9 360 aaPredicted RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 GZF1Q9H116 711 aaPredicted RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 EBF2Q9HAK2 575 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 TMEM30AQ9NV96 361 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 WDR70Q9NW82 654 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 LARSQ9P2J5 1176 aaKnown RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 LSM7Q9UK45 103 aaKnown RBP13.13□□□□□ -0.31
SNRPF-204ENST00000552085 PCDHGA8Q9Y5G5 932 aa13.13□□□□□ -0.31
SNRPF-204ENST00000552085 FAM47DPA6NHR8 397 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 WNT9AO14904 365 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 LZTS3O60299 673 aaPredicted RBP13.12□□□□□ -0.31
SNRPF-204ENST00000552085 IL18RAPO95256 599 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 TFAMQ00059 246 aaKnown RBP13.12□□□□□ -0.31
SNRPF-204ENST00000552085 NCAPHQ15003 741 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 ANKRD1Q15327 319 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 ZNF174Q15697 407 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 ISXQ2M1V0 245 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 TTC31Q49AM3 519 aaPredicted RBP13.12□□□□□ -0.31
SNRPF-204ENST00000552085 SLC45A4Q5BKX6 768 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 ADALQ6DHV7 355 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 DPH6Q7L8W6 267 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 KCNK18Q7Z418 384 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 ANKS1BQ7Z6G8 1248 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 CLEC14AQ86T13 490 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 PTRH1Q86Y79 214 aaKnown RBP13.12□□□□□ -0.31
SNRPF-204ENST00000552085 RBBP8NLQ8NC74 664 aaPredicted RBP13.12□□□□□ -0.31
SNRPF-204ENST00000552085 MYCBPAPQ8TBZ2 947 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 SORCS1Q8WY21 1168 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 P2RY11Q96G91 374 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 KLF16Q9BXK1 252 aaPredicted RBP13.12□□□□□ -0.31
SNRPF-204ENST00000552085 CIPCQ9C0C6 399 aa13.12□□□□□ -0.31
SNRPF-204ENST00000552085 GEMIN8Q9NWZ8 242 aaKnown RBP13.12□□□□□ -0.31
SNRPF-204ENST00000552085 A0A1B0GVM2 712 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 ANKRD63C9JTQ0 380 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 SDC3O75056 442 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 PENKP01210 267 aaPredicted RBP13.11□□□□□ -0.31
SNRPF-204ENST00000552085 PDGFRBP09619 1106 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 SCP2P22307 547 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
SNRPF-204ENST00000552085 CASRP41180 1078 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 GOLGA8FQ08AF8 430 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 GOLGA8DPQ0D2H9 430 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 TBR1Q16650 682 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 HS1BP3Q53T59 392 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 MDH1BQ5I0G3 518 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 CRELD2Q6UXH1 353 aaPredicted RBP13.11□□□□□ -0.31
SNRPF-204ENST00000552085 HS2ST1Q7LGA3 356 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 CCDC83Q8IWF9 413 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 ARL14Q8N4G2 192 aa13.11□□□□□ -0.31
SNRPF-204ENST00000552085 CXorf38Q8TB03 319 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms