RNA–Protein interactions for RNA: ENST00000551931.5

LETMD1-231, Transcript of LETM1 domain containing 1, human

TSL 3

Gene LETMD1, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-231	ENST00000551931	NCAM1	P13591	858 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	PDIA4	P13667	645 aa	Known RBP	13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	GNS	P15586	552 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	CORO1A	P31146	461 aa	Known RBP	13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	PSEN1	P49768	467 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	EFEMP1	Q12805	493 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	HNRNPD	Q14103	355 aa	Known RBP	13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	STARD3	Q14849	445 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	ZNF394	Q53GI3	561 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	WDR45B	Q5MNZ6	344 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	METTL3	Q86U44	580 aa	Known RBP	13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	CACUL1	Q86Y37	369 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	ZCCHC9	Q8N567	271 aa	Known RBP	13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	PNPLA1	Q8N8W4	532 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	DNASE2B	Q8WZ79	361 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	PIWIL1	Q96J94	861 aa	Known RBP	13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	DUSP16	Q9BY84	665 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	IMPG2	Q9BZV3	1241 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	NIF3L1	Q9GZT8	377 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	MMRN2	Q9H8L6	949 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	ITM2C	Q9NQX7	267 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	CLIC5	Q9NZA1	410 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	AGO1	Q9UL18	857 aa	Known RBP	13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	LHX6	Q9UPM6	363 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	TRAF3IP3	Q9Y228	551 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931	FRMD4B	Q9Y2L6	1034 aa		13.21	□□□□□ -0.29
LETMD1-231	ENST00000551931		A0A1B0GTW7	788 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931		A0A1B0GVL5	298 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	MEI4	A8MW99	385 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	MAPK13	O15264	365 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	CALU	O43852	315 aa	Predicted RBP	13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	PRR29	P0C7W0	189 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	RALA	P11233	206 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	PFKFB1	P16118	471 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	TRIM21	P19474	475 aa	Known RBP	13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	NR2F2	P24468	414 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	PRKCH	P24723	683 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	RDX	P35241	583 aa	Known RBP	13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	TPMT	P51580	245 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	COPA	P53621	1224 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	ZNF234	Q14588	700 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	LRSAM1	Q6UWE0	723 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	TADA2B	Q86TJ2	420 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	PROSER1	Q86XN7	944 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	TMPRSS6	Q8IU80	811 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	ADAMTS14	Q8WXS8	1223 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	SORCS1	Q8WY21	1168 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	IL21R	Q9HBE5	538 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	RCOR1	Q9UKL0	485 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	ZNF510	Q9Y2H8	683 aa		13.2	□□□□□ -0.3
LETMD1-231	ENST00000551931	CBFA2T3	O75081	653 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	CHKA	P35790	457 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	COG7	P83436	770 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	BNC1	Q01954	994 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	SCAP	Q12770	1279 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	DCAF12L1	Q5VU92	463 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	TMEM215	Q68D42	235 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	ATL3	Q6DD88	541 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	INTS8	Q75QN2	995 aa	Known RBP	13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	ANKS1B	Q7Z6G8	1248 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	DENND1C	Q8IV53	801 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	SPRYD3	Q8NCJ5	442 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	CADM4	Q8NFZ8	388 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	SEMA4D	Q92854	862 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	SIPA1	Q96FS4	1042 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	DCLK3	Q9C098	648 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	ZDHHC5	Q9C0B5	715 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	MIR1-1HG	Q9H1L0	117 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	ELOVL2	Q9NXB9	296 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	MARCH2	Q9P0N8	246 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	CFAP45	Q9UL16	551 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	MAPK8IP1	Q9UQF2	711 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	HPSE	Q9Y251	543 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	NFE2L3	Q9Y4A8	694 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	PCDHB9	Q9Y5E1	797 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	SLCO1B1	Q9Y6L6	691 aa		13.19	□□□□□ -0.3
LETMD1-231	ENST00000551931	METTL12	A8MUP2	240 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	NPC1	O15118	1278 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	SYNCRIP	O60506	623 aa	Known RBP	13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	IGLV3-19	P01714	112 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	ZNF132	P52740	706 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	RAD23B	P54727	409 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	NFIL3	Q16649	462 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	RAB41	Q5JT25	222 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	BHLHA9	Q7RTU4	235 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	SLCO6A1	Q86UG4	719 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	PIGZ	Q86VD9	579 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	FAM217A	Q8IXS0	508 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	FAM186B	Q8IYM0	893 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	CPXM2	Q8N436	756 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	SLC4A11	Q8NBS3	891 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	C1orf216	Q8TAB5	229 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	UCMA	Q8WVF2	138 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	NDRG1	Q92597	394 aa	Known RBP	13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	PRCC	Q92733	491 aa	Predicted RBP	13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	SNX21	Q969T3	373 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	HEXIM2	Q96MH2	286 aa	Known RBP	13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	ARID3A	Q99856	593 aa		13.18	□□□□□ -0.3

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