RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SUGT1Q9Y2Z0 365 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 DTNAQ9Y4J8 743 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 SLC4A4Q9Y6R1 1079 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 RTL9Q8NET4 1388 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 FER1L4A9Z1Z3 1794 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 SF3B1O75533 1304 aaKnown RBP eCLIP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 IGSF9BQ9UPX0 1349 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 A0A0B4J269 797 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 A0A1W2PQ67 120 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 PRAMEF22A3QJZ6 481 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 GTPBP10A4D1E9 387 aaKnown RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 MYMKA6NI61 221 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 PP2D1A8MPX8 630 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 GSG1L2A8MUP6 293 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 RNF103O00237 685 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 ACOX3O15254 700 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 TM9SF1O15321 606 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CLOCKO15516 846 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 JRKO75564 520 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 DDAH1O94760 285 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 ACSL3O95573 720 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 APOEP02649 317 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 TFPTP0C1Z6 253 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CCDC159P0C7I6 412 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 FAM58BPP0C7Q3 252 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 MSL3P1P0C860 447 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 NAT2P11245 290 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 NCAM1P13591 858 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 UCHL3P15374 230 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 KCNA2P16389 499 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 DCKP27707 260 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 RPA3P35244 121 aaPredicted RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 GNL1P36915 607 aaPredicted RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 ETV3P41162 512 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 GATA4P43694 442 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 ALDH1A3P47895 512 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 PREPP48147 710 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 HSPA13P48723 471 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 C21orf59P57076 290 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 RPS26P62854 115 aaKnown RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 DLG4P78352 724 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 AMPD3Q01432 767 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 MECOMQ03112 1051 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 SLC18A2Q05940 514 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 GRB10Q13322 594 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 TUBB3Q13509 450 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 LRP8Q14114 963 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 C16orf72Q14CZ0 275 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 EPHA7Q15375 998 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 SF3B4Q15427 424 aaKnown RBP eCLIP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 SLC15A2Q16348 729 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CCNG2Q16589 344 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 PFKFB3Q16875 520 aaPredicted RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 KCTD19Q17RG1 926 aaPredicted RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 RGS21Q2M5E4 152 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 EDRF1Q3B7T1 1238 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 TBC1D10BQ4KMP7 808 aaPredicted RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 TMEM119Q4V9L6 283 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 LRRC24Q50LG9 513 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 RABGAP1LQ5R372 815 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 EXOSC6Q5RKV6 272 aaKnown RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 EGFLAMQ63HQ2 1017 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 PPP4R4Q6NUP7 873 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CCDC137Q6PK04 289 aaKnown RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CLEC4GQ6UXB4 293 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 USP43Q70EL4 1123 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 TTC7BQ86TV6 843 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CARM1Q86X55 608 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 DZIP1Q86YF9 867 aaKnown RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 SCYL3Q8IZE3 742 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CADM3Q8N126 398 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 PQLC1Q8N2U9 271 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 PPM1KQ8N3J5 372 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 LSMEM1Q8N8F7 131 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CCDC89Q8N998 374 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 BANPQ8N9N5 519 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CATSPER1Q8NEC5 780 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 SLC35G2Q8TBE7 412 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 ACMSDQ8TDX5 336 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 XAGE3Q8WTP9 111 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 U2AF1L4Q8WU68 220 aaKnown RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 USP6NLQ92738 828 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 TMIGD2Q96BF3 282 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 ARHGEF26Q96DR7 871 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CEP95Q96GE4 821 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 DCUN1D1Q96GG9 259 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 FAM46AQ96IP4 442 aaKnown RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 RHOVQ96L33 236 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CCDC138Q96M89 665 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 TTC1Q99614 292 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 MYD88Q99836 296 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CLSTN3Q9BQT9 956 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 CCDC77Q9BR77 488 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 SLC39A3Q9BRY0 314 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 TMEM120AQ9BXJ8 343 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 EMILIN2Q9BXX0 1053 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 MRPL1Q9BYD6 325 aaKnown RBP5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 NMUR2Q9GZQ4 415 aa5.48□□□□□ -1.53
LSM3P2-201ENST00000551246 KCTD10Q9H3F6 313 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms