RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 UBE2TQ9NPD8 197 aaPredicted RBP13.62□□□□□ -0.23
NPAS3-209ENST00000551008 CD93Q9NPY3 652 aa13.62□□□□□ -0.23
NPAS3-209ENST00000551008 MBD1Q9UIS9 605 aaPredicted RBP13.62□□□□□ -0.23
NPAS3-209ENST00000551008 STOML2Q9UJZ1 356 aa13.62□□□□□ -0.23
NPAS3-209ENST00000551008 SLC27A6Q9Y2P4 619 aa13.62□□□□□ -0.23
NPAS3-209ENST00000551008 ASCC3Q8N3C0 2202 aaKnown RBP13.62□□□□□ -0.23
NPAS3-209ENST00000551008 GABRG2P18507 467 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 PON1P27169 355 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 HOXD9P28356 352 aaPredicted RBP13.61□□□□□ -0.23
NPAS3-209ENST00000551008 DGKGP49619 791 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 ATXN1P54253 815 aaKnown RBP13.61□□□□□ -0.23
NPAS3-209ENST00000551008 SLC8A3P57103 927 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 CETN1Q12798 172 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 PUM1Q14671 1186 aaKnown RBP eCLIP13.61□□□□□ -0.23
NPAS3-209ENST00000551008 STILQ15468 1287 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 MAP7D1Q3KQU3 841 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 TMEM215Q68D42 235 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 RNF43Q68DV7 783 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 TCEAL6Q6IPX3 200 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 ERMP1Q7Z2K6 904 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 SIX6OS1Q8N1H7 587 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 KCNV2Q8TDN2 545 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 IRGQQ8WZA9 623 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 SHC3Q92529 594 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 TCEAL3Q969E4 200 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 PLD4Q96BZ4 506 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 MYEOVQ96EZ4 313 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 HSFY1Q96LI6 401 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
NPAS3-209ENST00000551008 XPO6Q96QU8 1125 aaKnown RBP13.61□□□□□ -0.23
NPAS3-209ENST00000551008 SLC4A5Q9BY07 1137 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 DCLK3Q9C098 648 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 ABCC13Q9NSE7 274 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 OLA1Q9NTK5 396 aaKnown RBP13.61□□□□□ -0.23
NPAS3-209ENST00000551008 STRIP2Q9ULQ0 834 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 ZNF510Q9Y2H8 683 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 HBS1LQ9Y450 684 aaKnown RBP13.61□□□□□ -0.23
NPAS3-209ENST00000551008 PCDH15Q96QU1 1955 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 CACNA1EQ15878 2313 aa13.61□□□□□ -0.23
NPAS3-209ENST00000551008 TCRBV21S2A2A0A5A6 115 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 GTPBP10A4D1E9 387 aaKnown RBP13.6□□□□□ -0.23
NPAS3-209ENST00000551008 WASH3PC4AMC7 463 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 PAPSS1O43252 624 aaPredicted RBP13.6□□□□□ -0.23
NPAS3-209ENST00000551008 FGFR1OPO95684 399 aaKnown RBP13.6□□□□□ -0.23
NPAS3-209ENST00000551008 LTFP02788 710 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 ZNF806P0C7X5 589 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 PNMA6AP0CW24 399 aaPredicted RBP13.6□□□□□ -0.23
NPAS3-209ENST00000551008 KRT5P13647 590 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 HOXB2P14652 356 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 NTSR1P30989 418 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 MPLP40238 635 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 PITX1P78337 314 aaPredicted RBP13.6□□□□□ -0.23
NPAS3-209ENST00000551008 ENPP2Q13822 863 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 MEA1Q16626 185 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 FAM133BQ5BKY9 247 aaKnown RBP13.6□□□□□ -0.23
NPAS3-209ENST00000551008 NADSYN1Q6IA69 706 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 WDTC1Q8N5D0 677 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 WFDC5Q8TCV5 224 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 GPT2Q8TD30 523 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 HMGB4Q8WW32 186 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 ZNF606Q8WXB4 792 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 ERLEC1Q96DZ1 483 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 GABRG3Q99928 467 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 MIS12Q9H081 205 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 NUP62CLQ9H1M0 184 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 SLC6A17Q9H1V8 727 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 THAP9Q9H5L6 903 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 CACNA2D2Q9NY47 1150 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 APEX2Q9UBZ4 518 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 RAD54BQ9Y620 910 aa13.6□□□□□ -0.23
NPAS3-209ENST00000551008 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.59□□□□□ -0.23
NPAS3-209ENST00000551008 BCLAF3A2AJT9 711 aaKnown RBP13.59□□□□□ -0.23
NPAS3-209ENST00000551008 PRR5-ARHGAP8B1AHC4 643 aa13.59□□□□□ -0.23
NPAS3-209ENST00000551008 LETM1O95202 739 aaPredicted RBP13.59□□□□□ -0.23
NPAS3-209ENST00000551008 SLC6A4P31645 630 aa13.59□□□□□ -0.23
NPAS3-209ENST00000551008 CHKAP35790 457 aa13.59□□□□□ -0.23
NPAS3-209ENST00000551008 ARHGAP8P85298 464 aa13.59□□□□□ -0.23
NPAS3-209ENST00000551008 KCNMA1Q12791 1236 aa13.59□□□□□ -0.23
NPAS3-209ENST00000551008 MAN2A1Q16706 1144 aa13.59□□□□□ -0.23
NPAS3-209ENST00000551008 ARHGAP44Q17R89 818 aa13.59□□□□□ -0.23
NPAS3-209ENST00000551008 EXOC3L4Q17RC7 722 aa13.59□□□□□ -0.23
NPAS3-209ENST00000551008 HSP90AA4PQ58FG1 418 aa13.59□□□□□ -0.23
NPAS3-209ENST00000551008 GBP6Q6ZN66 633 aa13.59□□□□□ -0.23
NPAS3-209ENST00000551008 RBM43Q6ZSC3 357 aaKnown RBP13.59□□□□□ -0.23
NPAS3-209ENST00000551008 SCUBE3Q8IX30 993 aa13.59□□□□□ -0.23
NPAS3-209ENST00000551008 DQX1Q8TE96 717 aaKnown RBP13.59□□□□□ -0.23
NPAS3-209ENST00000551008 FCRL2Q96LA5 508 aaPredicted RBP13.59□□□□□ -0.23
NPAS3-209ENST00000551008 SAMSN1Q9NSI8 373 aaKnown RBP13.59□□□□□ -0.23
NPAS3-209ENST00000551008 PCDHGA5Q9Y5G8 931 aa13.59□□□□□ -0.23
NPAS3-209ENST00000551008 GOLGA6L7A0A1B0GV03 622 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 DCDC2BA2VCK2 349 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 E5RJQ4 531 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 SLC30A4O14863 429 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 TM4SF5O14894 197 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 THAP12O43422 761 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 TSPAN3O60637 253 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 IGLV3-25P01717 112 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 NDUFV2P19404 249 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 ERCC5P28715 1186 aaPredicted RBP13.58□□□□□ -0.24
NPAS3-209ENST00000551008 GNA15P30679 374 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms