RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 ATP5C1P36542 298 aaKnown RBP11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 TUBP50607 506 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 KPNA1P52294 538 aaPredicted RBP11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 TBX4P57082 545 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 SCAPQ12770 1279 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 NNTQ13423 1086 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 EIF4EBP2Q13542 120 aaPredicted RBP11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 DPYSL3Q14195 570 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 PPP2R5DQ14738 602 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 TRIP4Q15650 581 aaPredicted RBP11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 TAZQ16635 292 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 CA9Q16790 459 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 PPP6R3Q5H9R7 873 aaPredicted RBP11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 KAZNQ674X7 775 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 KLHDC10Q6PID8 442 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 ANKS1BQ7Z6G8 1248 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 RBM23Q86U06 439 aaKnown RBP11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 VSIG1Q86XK7 387 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 RFX6Q8HWS3 928 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 FAM71BQ8TC56 605 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 UBXN4Q92575 508 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 GCNAQ96QF7 691 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 ZNF670Q9BS34 389 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 TKTL2Q9H0I9 626 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 CCSER2Q9H7U1 834 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 TLE6Q9H808 572 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 PCDH18Q9HCL0 1135 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 ZNF334Q9HCZ1 680 aaPredicted RBP11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 RBM12Q9NTZ6 932 aaKnown RBP11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 RASAL2Q9UJF2 1139 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 DNMT3LQ9UJW3 386 aa11.98□□□□□ -0.49
CTDSP2-206ENST00000550144 TCRBV7S2A1N4TA0A589 114 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 SLC12A8A0AV02 714 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 EPOPA6NHQ4 379 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 SPDYE4A6NLX3 237 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 H3BRJ5 948 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 CCL16O15467 120 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 XYLBO75191 536 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 FGF19O95750 216 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 TBX18O95935 607 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 APOEP02649 317 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 F11P03951 625 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 HNRNPA1P09651 372 aaKnown RBP eCLIP11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 HOXA9P31269 272 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 ARL4AP40617 200 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 TERF1P54274 439 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 KLF1Q13351 362 aaPredicted RBP11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 TFDP2Q14188 446 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 TEX35Q5T0J7 233 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 CCDC70Q6NSX1 233 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 BBS12Q6ZW61 710 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 ADGRD2Q7Z7M1 963 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 MIB1Q86YT6 1006 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 MMGT1Q8N4V1 131 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 NOA1Q8NC60 698 aaKnown RBP11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 PPP2R3CQ969Q6 453 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 KCTD15Q96SI1 283 aaPredicted RBP11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 CORO1BQ9BR76 489 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 HERPUD2Q9BSE4 406 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 ASAH2Q9NR71 780 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 TMPRSS4Q9NRS4 437 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 HOMER3Q9NSC5 361 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 MTMR10Q9NXD2 777 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 ARHGEF38Q9NXL2 777 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 RCOR3Q9P2K3 495 aaPredicted RBP11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 SLC12A6Q9UHW9 1150 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 HBS1LQ9Y450 684 aaKnown RBP11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 HCFC2Q9Y5Z7 792 aa11.97□□□□□ -0.49
CTDSP2-206ENST00000550144 KCNU1A8MYU2 1149 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 COCHO43405 550 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 CST8O60676 142 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 PHF2O75151 1096 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 RFPL2O75678 378 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 MYL4P12829 197 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 PTPN2P17706 415 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 GABRR2P28476 465 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 CDC25CP30307 473 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 NRIP1P48552 1158 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 ZNF135P52742 658 aaPredicted RBP11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 RING1Q06587 406 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 MMRN1Q13201 1228 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 MTA1Q13330 715 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 SIX1Q15475 284 aaPredicted RBP11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 DUSP6Q16828 381 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 ANKRD20A8PQ5CZ79 823 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 TMEM150AQ86TG1 271 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 TMC8Q8IU68 726 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 KLHL7Q8IXQ5 586 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 HS6ST3Q8IZP7 471 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 PYROXD2Q8N2H3 581 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 ATP6V0D2Q8N8Y2 350 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 PRELID2Q8N945 189 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 TTC13Q8NBP0 860 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 TSC1Q92574 1164 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 MRPS31Q92665 395 aaKnown RBP11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 FAF2Q96CS3 445 aa11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 MRPL38Q96DV4 380 aaKnown RBP11.96□□□□□ -0.49
CTDSP2-206ENST00000550144 SLC39A13Q96H72 371 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms