RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 CCDC186Q7Z3E2 898 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 SCD5Q86SK9 330 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 TADA2BQ86TJ2 420 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 PDZD3Q86UT5 571 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 RBBP8NLQ8NC74 664 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 BAHD1Q8TBE0 780 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 UCMAQ8WVF2 138 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 ELMO3Q96BJ8 720 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 PIWIL1Q96J94 861 aaKnown RBP10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 ZNF396Q96N95 335 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 CDK5RAP1Q96SZ6 601 aaKnown RBP10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 CDC6Q99741 560 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 GPR174Q9BXC1 333 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 SLC2A11Q9BYW1 496 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 DCLK3Q9C098 648 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 CYP3A43Q9HB55 503 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 ELOVL2Q9NXB9 296 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 PLK2Q9NYY3 685 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 LAMA5O15230 3695 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 CKAP5Q14008 2032 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 BCAT2O15382 392 aaPredicted RBP10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 CYP26A1O43174 497 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 SYNCRIPO60506 623 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 CER1O95813 267 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 CASP1P29466 404 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 MATKP42679 507 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 IL12RB1P42701 662 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 ASPAP45381 313 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 BNC1Q01954 994 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 ORC1Q13415 861 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 EIF4HQ15056 248 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 HLA-BQ31612 363 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 DCAF12L1Q5VU92 463 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 C19orf48Q6RUI8 117 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 SCARA5Q6ZMJ2 495 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 CPXM2Q8N436 756 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 SETD7Q8WTS6 366 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 PRCCQ92733 491 aaPredicted RBP10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 ERLEC1Q96DZ1 483 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 SIPA1Q96FS4 1042 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 NT5C1AQ9BXI3 368 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 DUSP16Q9BY84 665 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 BACH2Q9BYV9 841 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 UBXN6Q9BZV1 441 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 BLZF1Q9H2G9 400 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 KCTD10Q9H3F6 313 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 GAREM1Q9H706 876 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 IL21RQ9HBE5 538 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 OSGEPQ9NPF4 335 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 SCUBE2Q9NQ36 999 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 TM7SF3Q9NS93 570 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 FAM49BQ9NUQ9 324 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 TOR4AQ9NXH8 423 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 HMGXB4Q9UGU5 601 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 NUDT5Q9UKK9 219 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 ITPR1Q14643 2758 aa10.35□□□□□ -0.75
TRAFD1-207ENST00000550051 MEI4A8MW99 385 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 PDXKO00764 312 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 MDM4O15151 490 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 MAPK13O15264 365 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 KLRC4O43908 158 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 CILPO75339 1184 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 RALAP11233 206 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 ADORA2BP29275 332 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 COPAP53621 1224 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 MCCD1P59942 119 aaPredicted RBP10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 STK4Q13043 487 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 CUL4BQ13620 913 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 ZNF234Q14588 700 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 SUZ12Q15022 739 aaKnown RBP10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 COL28A1Q2UY09 1125 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 C1orf220Q5T0J3 134 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 FAM217AQ8IXS0 508 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 BHMTQ93088 406 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 FAXDC2Q96IV6 333 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 TWNKQ96RR1 684 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 DNAI2Q9GZS0 605 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 MIR1-1HGQ9H1L0 117 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 EIF2B4Q9UI10 523 aaKnown RBP10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 NAGPAQ9UK23 515 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 AGO1Q9UL18 857 aaKnown RBP10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 CABIN1Q9Y6J0 2220 aa10.34□□□□□ -0.75
TRAFD1-207ENST00000550051 FLRT2O43155 660 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 HLA-DRAP01903 254 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 NR3C1P04150 777 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 CYBBP04839 570 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 ATXN1LP0C7T5 689 aaKnown RBP10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 ACADMP11310 421 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 PDIA4P13667 645 aaKnown RBP10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 CORO1AP31146 461 aaKnown RBP10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 AFMP43652 599 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 AFF3P51826 1226 aaKnown RBP10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 ENPEPQ07075 957 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 PDE4CQ08493 712 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 CAMK2GQ13555 558 aaPredicted RBP10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 TMEM215Q68D42 235 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 SPOPLQ6IQ16 392 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 ANKS1BQ7Z6G8 1248 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 ARHGAP18Q8N392 663 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 GALNT15Q8N3T1 639 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms