RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 INTS8Q75QN2 995 aaKnown RBP16.17■□□□□ 0.18
RAB5C-205ENST00000550013 METTL3Q86U44 580 aaKnown RBP16.17■□□□□ 0.18
RAB5C-205ENST00000550013 NAXDQ8IW45 347 aa16.17■□□□□ 0.18
RAB5C-205ENST00000550013 FAM186BQ8IYM0 893 aa16.17■□□□□ 0.18
RAB5C-205ENST00000550013 ZCCHC9Q8N567 271 aaKnown RBP16.17■□□□□ 0.18
RAB5C-205ENST00000550013 SPRYD3Q8NCJ5 442 aa16.17■□□□□ 0.18
RAB5C-205ENST00000550013 SORCS1Q8WY21 1168 aa16.17■□□□□ 0.18
RAB5C-205ENST00000550013 PIWIL1Q96J94 861 aaKnown RBP16.17■□□□□ 0.18
RAB5C-205ENST00000550013 AGO1Q9UL18 857 aaKnown RBP16.17■□□□□ 0.18
RAB5C-205ENST00000550013 ZNF510Q9Y2H8 683 aa16.17■□□□□ 0.18
RAB5C-205ENST00000550013 PLXNB3Q9ULL4 1909 aa16.17■□□□□ 0.18
RAB5C-205ENST00000550013 FAM221BA6H8Z2 402 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 TAF4O00268 1085 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 KRT13P13646 458 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 CMA1P23946 247 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 PRKCHP24723 683 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 CHKAP35790 457 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 TPMTP51580 245 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 COG7P83436 770 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 RING1Q06587 406 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 SLC14A1Q13336 389 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 HNRNPDQ14103 355 aaKnown RBP16.16■□□□□ 0.18
RAB5C-205ENST00000550013 ZNF234Q14588 700 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 NFIL3Q16649 462 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 ANKS1BQ7Z6G8 1248 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 CACUL1Q86Y37 369 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 DENND1CQ8IV53 801 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 PNPLA1Q8N8W4 532 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 DNASE2BQ8WZ79 361 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 SEMA4DQ92854 862 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 HEXIM2Q96MH2 286 aaKnown RBP16.16■□□□□ 0.18
RAB5C-205ENST00000550013 CDK5RAP1Q96SZ6 601 aaKnown RBP16.16■□□□□ 0.18
RAB5C-205ENST00000550013 DCLK3Q9C098 648 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 MIR1-1HGQ9H1L0 117 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 ITM2CQ9NQX7 267 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 MARCH2Q9P0N8 246 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 USP25Q9UHP3 1055 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 HPSEQ9Y251 543 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 PCDHB9Q9Y5E1 797 aa16.16■□□□□ 0.18
RAB5C-205ENST00000550013 PTPRBP23467 1997 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 A0A1B0GTW7 788 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 SLC12A8A0AV02 714 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 SYNCRIPO60506 623 aaKnown RBP16.15■□□□□ 0.18
RAB5C-205ENST00000550013 CAPNS1P04632 268 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 HSP90AA1P07900 732 aaKnown RBP16.15■□□□□ 0.18
RAB5C-205ENST00000550013 FTH1P19P0C7X4 201 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 COL9A2Q14055 689 aaPredicted RBP16.15■□□□□ 0.18
RAB5C-205ENST00000550013 DCAF12L1Q5VU92 463 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 TMEM215Q68D42 235 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 PIGZQ86VD9 579 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 TMPRSS6Q8IU80 811 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 HSCBQ8IWL3 235 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 SLC4A11Q8NBS3 891 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 RBBP8NLQ8NC74 664 aaPredicted RBP16.15■□□□□ 0.18
RAB5C-205ENST00000550013 UCMAQ8WVF2 138 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 SIPA1Q96FS4 1042 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 ARID3AQ99856 593 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 IL21RQ9HBE5 538 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 TMEM8AQ9HCN3 771 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 ELOVL2Q9NXB9 296 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 LHX6Q9UPM6 363 aa16.15■□□□□ 0.18
RAB5C-205ENST00000550013 NPC1O15118 1278 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 RHOBTB3O94955 611 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 MYL1P05976 194 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 PSMC2P35998 433 aaKnown RBP16.14■□□□□ 0.17
RAB5C-205ENST00000550013 COPAP53621 1224 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 RAD23BP54727 409 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 YWHAGP61981 247 aaKnown RBP eCLIP16.14■□□□□ 0.17
RAB5C-205ENST00000550013 BNC1Q01954 994 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 RAB41Q5JT25 222 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 RSRC2Q7L4I2 434 aaKnown RBP16.14■□□□□ 0.17
RAB5C-205ENST00000550013 CPXM2Q8N436 756 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 CCDC150Q8NCX0 1101 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 DDI1Q8WTU0 396 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 ADAMTS14Q8WXS8 1223 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 NDRG1Q92597 394 aaKnown RBP16.14■□□□□ 0.17
RAB5C-205ENST00000550013 EEF2KMTQ96G04 330 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 ZDHHC5Q9C0B5 715 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 CIPCQ9C0C6 399 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 DNAI2Q9GZS0 605 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 CISHQ9NSE2 258 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 STRIP2Q9ULQ0 834 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 FASNP49327 2511 aaKnown RBP16.14■□□□□ 0.17
RAB5C-205ENST00000550013 CABIN1Q9Y6J0 2220 aa16.14■□□□□ 0.17
RAB5C-205ENST00000550013 METTL12A8MUP2 240 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 TULP2O00295 520 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 CBFA2T3O75081 653 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 CYBBP04839 570 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 HLA-EP13747 358 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 NDUFA8P51970 172 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 ZNF132P52740 706 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 ENPEPQ07075 957 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 SCAPQ12770 1279 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 DPYDQ12882 1025 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 ADAM9Q13443 819 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 KRT39Q6A163 491 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 LRSAM1Q6UWE0 723 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 BHLHA9Q7RTU4 235 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 SLCO6A1Q86UG4 719 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 FAM124AQ86V42 546 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms