RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 DQX1Q8TE96 717 aaKnown RBP10.21□□□□□ -0.77
HDAC7-229ENST00000549883 IRGQQ8WZA9 623 aa10.21□□□□□ -0.77
HDAC7-229ENST00000549883 FAM149B1Q96BN6 582 aa10.21□□□□□ -0.77
HDAC7-229ENST00000549883 CDK5RAP1Q96SZ6 601 aaKnown RBP10.21□□□□□ -0.77
HDAC7-229ENST00000549883 TPSD1Q9BZJ3 242 aa10.21□□□□□ -0.77
HDAC7-229ENST00000549883 SEMA4AQ9H3S1 761 aa10.21□□□□□ -0.77
HDAC7-229ENST00000549883 OLA1Q9NTK5 396 aaKnown RBP10.21□□□□□ -0.77
HDAC7-229ENST00000549883 WDR35Q9P2L0 1181 aa10.21□□□□□ -0.77
HDAC7-229ENST00000549883 XPO7Q9UIA9 1087 aaKnown RBP10.21□□□□□ -0.77
HDAC7-229ENST00000549883 MMP17Q9ULZ9 603 aa10.21□□□□□ -0.77
HDAC7-229ENST00000549883 PCDHGC3Q9UN70 934 aa10.21□□□□□ -0.77
HDAC7-229ENST00000549883 SIK3Q9Y2K2 1263 aa10.21□□□□□ -0.77
HDAC7-229ENST00000549883 CEP192Q8TEP8 1941 aa10.21□□□□□ -0.78
HDAC7-229ENST00000549883 WASH3PC4AMC7 463 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 GFRA2O00451 464 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 MED7O43513 233 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 GRAP2O75791 330 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 FBXO21O94952 628 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 NCAM1P13591 858 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 TGM1P22735 817 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 TNFRSF4P43489 277 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 NRLP54845 237 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 MRPS21P82921 87 aaKnown RBP10.2□□□□□ -0.78
HDAC7-229ENST00000549883 MYL5Q02045 173 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 PTK2Q05397 1052 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 SIM2Q14190 667 aaPredicted RBP10.2□□□□□ -0.78
HDAC7-229ENST00000549883 PPP2R5DQ14738 602 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 CRY1Q16526 586 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 GEN1Q17RS7 908 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 PTPN20Q4JDL3 420 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 C2CD6Q53TS8 623 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 TAF3Q5VWG9 929 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 ANO7Q6IWH7 933 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 NOP9Q86U38 636 aaKnown RBP10.2□□□□□ -0.78
HDAC7-229ENST00000549883 TAC4Q86UU9 113 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 KBTBD6Q86V97 674 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 FAM217AQ8IXS0 508 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 KIAA2013Q8IYS2 634 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 FAM160A2Q8N612 972 aaPredicted RBP10.2□□□□□ -0.78
HDAC7-229ENST00000549883 FRMD1Q8N878 549 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 MDGA1Q8NFP4 955 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 WFDC5Q8TCV5 224 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 STK32AQ8WU08 396 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 SLC20A1Q8WUM9 679 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 DDX1Q92499 740 aaKnown RBP10.2□□□□□ -0.78
HDAC7-229ENST00000549883 NUP205Q92621 2012 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 PLD4Q96BZ4 506 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 FCRL2Q96LA5 508 aaPredicted RBP10.2□□□□□ -0.78
HDAC7-229ENST00000549883 ADAM33Q9BZ11 813 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 DCLK3Q9C098 648 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 PARD6AQ9NPB6 346 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 NLRC4Q9NPP4 1024 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 FAM207AQ9NSI2 230 aaPredicted RBP10.2□□□□□ -0.78
HDAC7-229ENST00000549883 LIMA1Q9UHB6 759 aaKnown RBP10.2□□□□□ -0.78
HDAC7-229ENST00000549883 FBXO10Q9UK96 956 aa10.2□□□□□ -0.78
HDAC7-229ENST00000549883 HBS1LQ9Y450 684 aaKnown RBP10.2□□□□□ -0.78
HDAC7-229ENST00000549883 GON4LQ3T8J9 2241 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.19□□□□□ -0.78
HDAC7-229ENST00000549883 F8VZ95 297 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 AXIN1O15169 862 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 GFPT2O94808 682 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 APBB3O95704 486 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 CYP11B1P15538 503 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 CHRNB2P17787 502 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 TFE3P19532 575 aaPredicted RBP10.19□□□□□ -0.78
HDAC7-229ENST00000549883 HOXD9P28356 352 aaPredicted RBP10.19□□□□□ -0.78
HDAC7-229ENST00000549883 ACADSBP45954 432 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 DGKGP49619 791 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 TBX4P57082 545 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 POLR2FP61218 127 aaKnown RBP10.19□□□□□ -0.78
HDAC7-229ENST00000549883 SYCP1Q15431 976 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 CCDC6Q16204 474 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 FAM133BQ5BKY9 247 aaKnown RBP10.19□□□□□ -0.78
HDAC7-229ENST00000549883 TMEM215Q68D42 235 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 KIAA1211LQ6NV74 962 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 FAM183BPQ6ZVS7 135 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 DHX40Q8IX18 779 aaKnown RBP10.19□□□□□ -0.78
HDAC7-229ENST00000549883 DEFB106AQ8N104 65 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 CPXM2Q8N436 756 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 ZNF513Q8N8E2 541 aaPredicted RBP10.19□□□□□ -0.78
HDAC7-229ENST00000549883 TSTD1Q8NFU3 115 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 GAB3Q8WWW8 586 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 RLN3Q8WXF3 142 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 SORCS1Q8WY21 1168 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 RUBCNQ92622 972 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 EXOC4Q96A65 974 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 ACDQ96AP0 544 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 SLC39A13Q96H72 371 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 PPP1R13BQ96KQ4 1090 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 FAM81BQ96LP2 452 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 XPO6Q96QU8 1125 aaKnown RBP10.19□□□□□ -0.78
HDAC7-229ENST00000549883 HINFPQ9BQA5 517 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 FUCA2Q9BTY2 467 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 SLC6A17Q9H1V8 727 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 LHX5Q9H2C1 402 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 CALCOCO1Q9P1Z2 691 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 NCDNQ9UBB6 729 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 NOCTQ9UK39 431 aaKnown RBP10.19□□□□□ -0.78
HDAC7-229ENST00000549883 ZNF510Q9Y2H8 683 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 RAD54BQ9Y620 910 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms