RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 FMNL3Q8IVF7 1028 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 SFTPA1Q8IWL2 248 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 UNC45BQ8IWX7 931 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 FAM217AQ8IXS0 508 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 OLIG1Q8TAK6 271 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 DDI1Q8WTU0 396 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 STK32AQ8WU08 396 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 DDX1Q92499 740 aaKnown RBP11.9□□□□□ -0.5
BEST3-209ENST00000548658 KAT5Q92993 513 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 TPSD1Q9BZJ3 242 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 CLSTN2Q9H4D0 955 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.9□□□□□ -0.5
BEST3-209ENST00000548658 KIAA1549LQ6ZVL6 1849 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 SDK1Q7Z5N4 2213 aa11.9□□□□□ -0.51
BEST3-209ENST00000548658 DCHS1Q96JQ0 3298 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.89□□□□□ -0.51
BEST3-209ENST00000548658 TCRBV21S2A2A0A5A6 115 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 RIOK3O14730 519 aaKnown RBP11.89□□□□□ -0.51
BEST3-209ENST00000548658 SLC30A4O14863 429 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 ZNF217O75362 1048 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 LTFP02788 710 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 HNRNPLP14866 589 aaKnown RBP eCLIP11.89□□□□□ -0.51
BEST3-209ENST00000548658 BRD2P25440 801 aaKnown RBP11.89□□□□□ -0.51
BEST3-209ENST00000548658 ERCC5P28715 1186 aaPredicted RBP11.89□□□□□ -0.51
BEST3-209ENST00000548658 LIMK1P53667 647 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 CREB5Q02930 508 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 EIF4HQ15056 248 aaKnown RBP11.89□□□□□ -0.51
BEST3-209ENST00000548658 EXOC3L4Q17RC7 722 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 AASDHQ4L235 1098 aaPredicted RBP11.89□□□□□ -0.51
BEST3-209ENST00000548658 PLA2G2CQ5R387 149 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 ADGRF1Q5T601 910 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 FYB2Q5VWT5 728 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 NUGGCQ68CJ6 796 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 PMS2CLQ68D20 193 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 MSANTD2Q6P1R3 559 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 CLEC17AQ6ZS10 378 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 LPCAT2Q7L5N7 544 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 BHLHA9Q7RTU4 235 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 ARHGEF19Q8IW93 802 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 ZNF557Q8N988 423 aaPredicted RBP11.89□□□□□ -0.51
BEST3-209ENST00000548658 HMGB4Q8WW32 186 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 NDRG1Q92597 394 aaKnown RBP11.89□□□□□ -0.51
BEST3-209ENST00000548658 EDEM1Q92611 657 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 BHMTQ93088 406 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 KREMEN1Q96MU8 473 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 GABRG3Q99928 467 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 THAP9Q9H5L6 903 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 PLK2Q9NYY3 685 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 APEX2Q9UBZ4 518 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 STOML2Q9UJZ1 356 aa11.89□□□□□ -0.51
BEST3-209ENST00000548658 DMXL1Q9Y485 3027 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 BCLAF3A2AJT9 711 aaKnown RBP11.88□□□□□ -0.51
BEST3-209ENST00000548658 ANTXRLA6NF34 631 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 PRRT4C9JH25 899 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 DCLK1O15075 740 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 TRIM24O15164 1050 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 LETM1O95202 739 aaPredicted RBP11.88□□□□□ -0.51
BEST3-209ENST00000548658 CAVIN2O95810 425 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 P2RY2P41231 377 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 GPD2P43304 727 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 MTIF2P46199 727 aaKnown RBP11.88□□□□□ -0.51
BEST3-209ENST00000548658 RPL34P49207 117 aaKnown RBP11.88□□□□□ -0.51
BEST3-209ENST00000548658 SLC11A2P49281 568 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 RGS7P49802 495 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 SNX16P57768 344 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 RING1Q06587 406 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 STARD3Q14849 445 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 MPP7Q5T2T1 576 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 EGFLAMQ63HQ2 1017 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 SLC36A4Q6YBV0 504 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 TOGARAM2Q6ZUX3 1019 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 BEND5Q7L4P6 421 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 ANKS1BQ7Z6G8 1248 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 ZNF606Q8WXB4 792 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 AZIN2Q96A70 460 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 TMA16Q96EY4 203 aaKnown RBP11.88□□□□□ -0.51
BEST3-209ENST00000548658 MED15Q96RN5 788 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 DDX50Q9BQ39 737 aaKnown RBP11.88□□□□□ -0.51
BEST3-209ENST00000548658 ZSWIM1Q9BR11 485 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 NUP62CLQ9H1M0 184 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 ST7Q9NRC1 585 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 SFMBT1Q9UHJ3 866 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 INVSQ9Y283 1065 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 CEP250Q9BV73 2442 aa11.88□□□□□ -0.51
BEST3-209ENST00000548658 EML5Q05BV3 1969 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 A0A1W2PQF6 199 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 CAPN9O14815 690 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 IRAK2O43187 625 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 AP5Z1O43299 807 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 NCAM1P13591 858 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 SLC9A1P19634 815 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 GNA15P30679 374 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 ARID5AQ03989 594 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 PTK2Q05397 1052 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 NNTQ13423 1086 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 MAN2A1Q16706 1144 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 IL31Q6EBC2 164 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 SCUBE3Q8IX30 993 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 IPO4Q8TEX9 1081 aaKnown RBP11.87□□□□□ -0.51
BEST3-209ENST00000548658 SERPINB11Q96P15 392 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms