RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	PPL	O60437	1756 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	CASZ1	Q86V15	1759 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	MYOM1	P52179	1685 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	EIF3A	Q14152	1382 aa	Known RBP	4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	ABCC11	Q96J66	1382 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	MAP3K5	Q99683	1374 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211		A0A1W2PPL8	197 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211		H3BNX3	289 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	AGPS	O00116	658 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	SRGAP2	O75044	1071 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	CREB1	P16220	341 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	UQCRC1	P31930	480 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	THBS3	P49746	956 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	TWIST1	Q15672	202 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	DAAM2	Q86T65	1068 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	LRGUK	Q96M69	825 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	ACO2	Q99798	780 aa	Known RBP	4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	STK32B	Q9NY57	414 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	DNMT3B	Q9UBC3	853 aa	Known RBP	4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	PI4KB	Q9UBF8	816 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	MGAT4C	Q9UBM8	478 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	USP22	Q9UPT9	525 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	THRAP3	Q9Y2W1	955 aa	Known RBP	4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	CDY1	Q9Y6F8	540 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	SQOR	Q9Y6N5	450 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211	CLTCL1	P53675	1640 aa		4.45	□□□□□ -1.7
RPAP3-205	ENST00000548211		H3BML4	177 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211		H7C4K7	107 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	TBC1D4	O60343	1298 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	IGSF3	O75054	1194 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	RNF8	O76064	485 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	RASAL1	O95294	804 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	CRYAB	P02511	175 aa	Known RBP	4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	HMGB1	P09429	215 aa	Known RBP	4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	CTSA	P10619	480 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	HGF	P14210	728 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	HSPA6	P17066	643 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	VCAM1	P19320	739 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	PRKAR1B	P31321	381 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	ITGA8	P53708	1063 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	ID2	Q02363	134 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	DEUP1	Q05D60	604 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	CACHD1	Q5VU97	1274 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	B3GNT9	Q6UX72	402 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	C9orf47	Q6ZRZ4	202 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	TCP11L2	Q8N4U5	519 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	VN1R3	Q9BXE9	311 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	TRIM5	Q9C035	493 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	POT1	Q9NUX5	634 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	ZSCAN32	Q9NX65	697 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	STK26	Q9P289	416 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	OVOS2	A0A0G2JMS6	1433 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	OVOS2	A0A0J9YW53	1432 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	OVOS2	Q6IE36	1432 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	ANKAR	Q7Z5J8	1434 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	USP19	O94966	1318 aa		4.44	□□□□□ -1.7
RPAP3-205	ENST00000548211	DHX57	Q6P158	1386 aa	Known RBP	4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	ALS2	Q96Q42	1657 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	CLIC1	O00299	241 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	MCM5	P33992	734 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	ME1	P48163	572 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	TIRAP	P58753	221 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	SLC14A1	Q13336	389 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	KCNB1	Q14721	858 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	ANKRD13B	Q86YJ7	626 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	TPH2	Q8IWU9	490 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	METTL25	Q8N6Q8	603 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	IL31RA	Q8NI17	732 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	HS6ST2	Q96MM7	605 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	RHOBTB2	Q9BYZ6	727 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	XPNPEP3	Q9NQH7	507 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	SBF2	Q86WG5	1849 aa		4.43	□□□□□ -1.7
RPAP3-205	ENST00000548211	ANKRD30B	Q9BXX2	1392 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	PRR23D1	E9PI22	279 aa	Predicted RBP	4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	GTPBP1	O00178	669 aa	Known RBP	4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	TBX3	O15119	743 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	RGS10	O43665	173 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	OAZ2	O95190	189 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	TOMM40	O96008	361 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	CT47B1	P0C2W7	299 aa	Predicted RBP	4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	PHKG2	P15735	406 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	EPHA3	P29320	983 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	RAB32	Q13637	225 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	MFSD13A	Q14CX5	517 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	SLC15A2	Q16348	729 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	C4orf46	Q504U0	113 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	SWSAP1	Q6NVH7	229 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	DEF8	Q6ZN54	512 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	COLCA1	Q6ZS62	124 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	RAB11FIP4	Q86YS3	637 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	SLC35G2	Q8TBE7	412 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	WIPF2	Q8TF74	440 aa	Predicted RBP	4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	KAZALD1	Q96I82	304 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	SNX15	Q9NRS6	342 aa		4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	PARP4	Q9UKK3	1724 aa	Known RBP	4.42	□□□□□ -1.7
RPAP3-205	ENST00000548211	KIAA0232	Q92628	1395 aa		4.41	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms