RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 EMC1Q8N766 993 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 JOSD2Q8TAC2 188 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 TTC8Q8TAM2 541 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 SELENOOQ9BVL4 669 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 DEF6Q9H4E7 631 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 FAM204AQ9H8W3 233 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 ARHGEF3Q9NR81 526 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 DDIT4Q9NX09 232 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 CALCOCO1Q9P1Z2 691 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 STAP1Q9ULZ2 295 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 NFATC1O95644 943 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 TFE3P19532 575 aaPredicted RBP21.31■■□□□ 1
HMGA2-211ENST00000545998 GBP1P32455 592 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 MLLT6P55198 1093 aaPredicted RBP21.31■■□□□ 1
HMGA2-211ENST00000545998 MLF2Q15773 248 aaPredicted RBP21.31■■□□□ 1
HMGA2-211ENST00000545998 CCDC122Q5T0U0 273 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 NUGGCQ68CJ6 796 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 PLEKHA7Q6IQ23 1121 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 SIX5Q8N196 739 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 CPA6Q8N4T0 437 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 SPC24Q8NBT2 197 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 TRIM11Q96F44 468 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 PGAP3Q96FM1 320 aaPredicted RBP21.31■■□□□ 1
HMGA2-211ENST00000545998 CCDC42Q96M95 316 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 C2CD4BA6NLJ0 364 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 M0QYT0 321 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 ATMINO43313 823 aaPredicted RBP21.31■■□□□ 1
HMGA2-211ENST00000545998 MYBL1P10243 752 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 GLULP15104 373 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 RFC1P35251 1148 aaPredicted RBP21.31■■□□□ 1
HMGA2-211ENST00000545998 MAMLD1Q13495 774 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 RHBDF2Q6PJF5 856 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 BNIPLQ7Z465 357 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 UNC45BQ8IWX7 931 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 RXFP2Q8WXD0 754 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 ZNF653Q96CK0 615 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 CFAP57Q96MR6 1250 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 TBCBQ99426 244 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 PARVAQ9NVD7 372 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 CNOT8Q9UFF9 292 aaKnown RBP21.31■■□□□ 1
HMGA2-211ENST00000545998 PIAS3Q9Y6X2 628 aa21.31■■□□□ 1
HMGA2-211ENST00000545998 DLL1O00548 723 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 AKR1B10O60218 316 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 LATS1O95835 1130 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 CYP17A1P05093 508 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 PDGFRAP16234 1089 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 FECHP22830 423 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 SULT1E1P49888 294 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 PRKCQQ04759 706 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 DHCR24Q15392 516 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 CCDC14Q49A88 953 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 FAM217AQ8IXS0 508 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 MCEEQ96PE7 176 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 C8orf33Q9H7E9 229 aaPredicted RBP21.3■■□□□ 1
HMGA2-211ENST00000545998 STOML2Q9UJZ1 356 aa21.3■■□□□ 1
HMGA2-211ENST00000545998 SYNJ2BP-COX16A0A087WUM0 186 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 TMEM221A6NGB7 291 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 SHISA7A6NL88 538 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 M0R296 226 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 SOX9P48436 509 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 RPL7AP62424 266 aaKnown RBP21.29■■□□□ 1
HMGA2-211ENST00000545998 NME3Q13232 169 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 ZC3H12AQ5D1E8 599 aaKnown RBP21.29■■□□□ 1
HMGA2-211ENST00000545998 TPRG1Q6ZUI0 275 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 AZIN2Q96A70 460 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 CHFRQ96EP1 664 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 THAP2Q9H0W7 228 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 SPHK2Q9NRA0 654 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 PIGVQ9NUD9 493 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 COX16Q9P0S2 106 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 ZDBF2Q9HCK1 2354 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 MIA3Q5JRA6 1907 aa21.29■■□□□ 1
HMGA2-211ENST00000545998 ABCB4P21439 1286 aa21.28■■□□□ 1
HMGA2-211ENST00000545998 SDC4P31431 198 aa21.28■■□□□ 1
HMGA2-211ENST00000545998 GJA4P35212 333 aa21.28■■□□□ 1
HMGA2-211ENST00000545998 PTPN9P43378 593 aa21.28■■□□□ 1
HMGA2-211ENST00000545998 STARD6P59095 220 aa21.28■■□□□ 1
HMGA2-211ENST00000545998 NR1H3Q13133 447 aa21.28■■□□□ 1
HMGA2-211ENST00000545998 LY6G5CQ5SRR4 150 aa21.28■■□□□ 1
HMGA2-211ENST00000545998 TMEM25Q86YD3 366 aa21.28■■□□□ 1
HMGA2-211ENST00000545998 MSANTD3Q96H12 275 aa21.28■■□□□ 1
HMGA2-211ENST00000545998 SPTLC3Q9NUV7 552 aa21.28■■□□□ 1
HMGA2-211ENST00000545998 TMEM51Q9NW97 253 aa21.28■■□□□ 1
HMGA2-211ENST00000545998 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.28■■□□□ 15e-9■□□□□ 10.9
HMGA2-211ENST00000545998 ANKRD62A6NC57 917 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 KCNU1A8MYU2 1149 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 SPECC1L-ADORA2AF8WAN1 911 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 ENDOD1O94919 500 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 ADH1CP00326 375 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 F9P00740 461 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 GPD1P21695 349 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 CCR1P32246 355 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 CTHP32929 405 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 CHKAP35790 457 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 SLC11A2P49281 568 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 CXCR3P49682 368 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 GALCP54803 685 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 DEUP1Q05D60 604 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 PPP2R5DQ14738 602 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 C15orf59Q2T9L4 293 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms