RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 HEATR3Q7Z4Q2 680 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 ZSWIM9Q86XI8 627 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 RFX6Q8HWS3 928 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 TMTC1Q8IUR5 882 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 TBC1D10CQ8IV04 446 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 ERI1Q8IV48 349 aaKnown RBP5.3□□□□□ -1.56
UBE4A-203ENST00000545354 TRMT2AQ8IZ69 625 aaKnown RBP5.3□□□□□ -1.56
UBE4A-203ENST00000545354 CYP4X1Q8N118 509 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 C10orf53Q8N6V4 93 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 FAM71DQ8N9W8 422 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 MFSD2AQ8NA29 543 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 AVL9Q8NBF6 648 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 PCYOX1LQ8NBM8 494 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 VANGL1Q8TAA9 524 aaPredicted RBP5.3□□□□□ -1.56
UBE4A-203ENST00000545354 SETD7Q8WTS6 366 aaKnown RBP5.3□□□□□ -1.56
UBE4A-203ENST00000545354 NSMCE2Q96MF7 247 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 ZDHHC15Q96MV8 337 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 C7orf26Q96N11 449 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 CAMK1GQ96NX5 476 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 TBCBQ99426 244 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 FERMT1Q9BQL6 677 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 NTMT1Q9BV86 223 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 TEKT3Q9BXF9 490 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 NFKBIZQ9BYH8 718 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 ANKRD2Q9GZV1 360 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 RAVER2Q9HCJ3 691 aaKnown RBP5.3□□□□□ -1.56
UBE4A-203ENST00000545354 CYP39A1Q9NYL5 469 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 CFAP97Q9P2B7 532 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 TJP2Q9UDY2 1190 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 SALL4Q9UJQ4 1053 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 VAV3Q9UKW4 847 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 NOB1Q9ULX3 412 aaKnown RBP5.3□□□□□ -1.56
UBE4A-203ENST00000545354 PCDHA3Q9Y5H8 950 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 KLF2Q9Y5W3 355 aaPredicted RBP5.3□□□□□ -1.56
UBE4A-203ENST00000545354 NUP155O75694 1391 aa5.3□□□□□ -1.56
UBE4A-203ENST00000545354 C9orf84Q5VXU9 1444 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 DCDC2CA8MYV0 355 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 H0YJX3 145 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 H3BUI4 141 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 TRIM77I1YAP6 450 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 TOR1AO14656 332 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 AQP9O43315 295 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 MAFKO60675 156 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 KERAO60938 352 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 APOL3O95236 402 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 PLCG1P19174 1290 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 TCEA1P23193 301 aaKnown RBP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 CHMP24386 653 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 PON1P27169 355 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 CTNNB1P35222 781 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 SLC15A1P46059 708 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 CRKP46108 304 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 RPL5P46777 297 aaKnown RBP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 STAT5BP51692 787 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 SUCLG1P53597 346 aaKnown RBP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 PEX3P56589 373 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 ZNF280AP59817 542 aaPredicted RBP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 GNG11P61952 73 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 PHC1P78364 1004 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 CDR2Q01850 454 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 C2orf54Q08AI8 447 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 FADDQ13158 208 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 DYRK1AQ13627 763 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 SPARCL1Q14515 664 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 TMEM132BQ14DG7 1078 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 SNX17Q15036 470 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 RTN1Q16799 776 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 ZNF829Q3KNS6 432 aaPredicted RBP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 PITRM1Q5JRX3 1037 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 GNASQ5JWF2 1037 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 FAM205BPQ63HN1 556 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 SLC30A6Q6NXT4 461 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 SYCE2Q6PIF2 218 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 HHIPL2Q6UWX4 724 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 DPP8Q6V1X1 898 aaPredicted RBP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 LDHAL6AQ6ZMR3 332 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 TAS2R42Q7RTR8 314 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 NECAB2Q7Z6G3 386 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 SETD3Q86TU7 594 aaPredicted RBP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 ZNF589Q86UQ0 364 aaPredicted RBP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 ZC3H18Q86VM9 953 aaKnown RBP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 HPS6Q86YV9 775 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 KSR1Q8IVT5 923 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 FMR1NBQ8N0W7 255 aaPredicted RBP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 AGGF1Q8N302 714 aaeCLIP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 KLHL36Q8N4N3 616 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 SIMC1Q8NDZ2 872 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 ZNF516Q92618 1163 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 MTMR8Q96EF0 704 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 AHCYL2Q96HN2 611 aaKnown RBP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 HES6Q96HZ4 224 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 SERPINB12Q96P63 405 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 WDR24Q96S15 920 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 WRNIP1Q96S55 665 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 CDK19Q9BWU1 502 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 BRIP1Q9BX63 1249 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 ZNF717Q9BY31 904 aaPredicted RBP5.29□□□□□ -1.56
UBE4A-203ENST00000545354 NUP62CLQ9H1M0 184 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 C1orf21Q9H246 121 aa5.29□□□□□ -1.56
UBE4A-203ENST00000545354 CBX8Q9HC52 389 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms