RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 ATP5C1P36542 298 aaKnown RBP14.3□□□□□ -0.12
SCARB1-209ENST00000545305 ARSEP51690 589 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 ZNF135P52742 658 aaPredicted RBP14.3□□□□□ -0.12
SCARB1-209ENST00000545305 TERF1P54274 439 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 TBX4P57082 545 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 DPYSL3Q14195 570 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 PPP2R5DQ14738 602 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 LLGL1Q15334 1064 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 TRIP4Q15650 581 aaPredicted RBP14.3□□□□□ -0.12
SCARB1-209ENST00000545305 CA9Q16790 459 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 MMGT1Q8N4V1 131 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 SLC22A17Q8WUG5 538 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 KCTD15Q96SI1 283 aaPredicted RBP14.3□□□□□ -0.12
SCARB1-209ENST00000545305 TKTL2Q9H0I9 626 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 CCSER2Q9H7U1 834 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 TLE6Q9H808 572 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 ZNF334Q9HCZ1 680 aaPredicted RBP14.3□□□□□ -0.12
SCARB1-209ENST00000545305 ASAH2Q9NR71 780 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 HOMER3Q9NSC5 361 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 RCOR3Q9P2K3 495 aaPredicted RBP14.3□□□□□ -0.12
SCARB1-209ENST00000545305 SLC12A6Q9UHW9 1150 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 DNMT3LQ9UJW3 386 aa14.3□□□□□ -0.12
SCARB1-209ENST00000545305 SLC12A8A0AV02 714 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 CCL16O15467 120 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 PHF2O75151 1096 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 CD48P09326 243 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 HNRNPA1P09651 372 aaKnown RBP eCLIP14.29□□□□□ -0.12
SCARB1-209ENST00000545305 KRT10P13645 584 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 EPCAMP16422 314 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 CDC25CP30307 473 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 MTA1Q13330 715 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 TAZQ16635 292 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 C8orf74Q6P047 294 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 KLHDC10Q6PID8 442 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 BBS12Q6ZW61 710 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 MIB1Q86YT6 1006 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 KLHL7Q8IXQ5 586 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 ATP6V0D2Q8N8Y2 350 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 TTC13Q8NBP0 860 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 NOA1Q8NC60 698 aaKnown RBP14.29□□□□□ -0.12
SCARB1-209ENST00000545305 FAM71BQ8TC56 605 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 MRPS31Q92665 395 aaKnown RBP14.29□□□□□ -0.12
SCARB1-209ENST00000545305 RUNDC3BQ96NL0 473 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 KRT12Q99456 494 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 EPAS1Q99814 870 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 SLITRK6Q9H5Y7 841 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.29□□□□□ -0.125e-9■■■■■ 34.4
SCARB1-209ENST00000545305 ARHGEF38Q9NXL2 777 aa14.29□□□□□ -0.12
SCARB1-209ENST00000545305 HBS1LQ9Y450 684 aaKnown RBP14.29□□□□□ -0.12
SCARB1-209ENST00000545305 MTCL1Q9Y4B5 1905 aaKnown RBP14.29□□□□□ -0.12
SCARB1-209ENST00000545305 UQCRHLA0A096LP55 91 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 TCRBV7S2A1N4TA0A589 114 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 APOL1O14791 398 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 PER2O15055 1255 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 CST8O60676 142 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 TBX18O95935 607 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 MOCS2O96007 188 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-209ENST00000545305 UQCRHP07919 91 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 ZFXP17010 805 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-209ENST00000545305 GABRR2P28476 465 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 CHRNA3P32297 505 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 GTF2F1P35269 517 aaKnown RBP eCLIP14.28□□□□□ -0.123e-22■□□□□ 9.5
SCARB1-209ENST00000545305 NRIP1P48552 1158 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 RGS19P49795 217 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 DYNLT1P63172 113 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 MMRN1Q13201 1228 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 KLF1Q13351 362 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-209ENST00000545305 EIF4EBP2Q13542 120 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-209ENST00000545305 DUSP6Q16828 381 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 ANKRD20A8PQ5CZ79 823 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 NUGGCQ68CJ6 796 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 ANKS1BQ7Z6G8 1248 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 ADGRD2Q7Z7M1 963 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 RBM23Q86U06 439 aaKnown RBP14.28□□□□□ -0.12
SCARB1-209ENST00000545305 C12orf50Q8NA57 414 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-209ENST00000545305 LEMD2Q8NC56 503 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 CCDC26Q8TAB7 109 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 MAGOHBQ96A72 148 aaKnown RBP14.28□□□□□ -0.12
SCARB1-209ENST00000545305 FCRL2Q96LA5 508 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-209ENST00000545305 RNF157Q96PX1 679 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 HAPLN3Q96S86 360 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 CDCA3Q99618 268 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-209ENST00000545305 CORO1BQ9BR76 489 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 FRMD8P1Q9BZ68 369 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-209ENST00000545305 PRDM16Q9HAZ2 1276 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 TRPC7Q9HCX4 862 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 ZDHHC7Q9NXF8 308 aa14.28□□□□□ -0.12
SCARB1-209ENST00000545305 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.28□□□□□ -0.126e-7■□□□□ 10.6
SCARB1-209ENST00000545305 V9GYY5 206 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-209ENST00000545305 EPOPA6NHQ4 379 aa14.27□□□□□ -0.13
SCARB1-209ENST00000545305 EEF2KO00418 725 aaKnown RBP14.27□□□□□ -0.13
SCARB1-209ENST00000545305 DAPK3O43293 454 aa14.27□□□□□ -0.13
SCARB1-209ENST00000545305 CTIFO43310 598 aaKnown RBP14.27□□□□□ -0.13
SCARB1-209ENST00000545305 COCHO43405 550 aa14.27□□□□□ -0.13
SCARB1-209ENST00000545305 CREB3O43889 395 aa14.27□□□□□ -0.13
SCARB1-209ENST00000545305 OAS1P00973 400 aaKnown RBP14.27□□□□□ -0.13
SCARB1-209ENST00000545305 F11P03951 625 aa14.27□□□□□ -0.13
SCARB1-209ENST00000545305 HMBSP08397 361 aa14.27□□□□□ -0.13
SCARB1-209ENST00000545305 POU2F2P09086 479 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms