RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TRMT11Q7Z4G4 463 aaKnown RBP16.39■□□□□ 0.21
CCDC78-216ENST00000544996 C1orf131Q8NDD1 294 aaKnown RBP16.39■□□□□ 0.21
CCDC78-216ENST00000544996 NEK11Q8NG66 645 aa16.39■□□□□ 0.21
CCDC78-216ENST00000544996 DQX1Q8TE96 717 aaKnown RBP16.39■□□□□ 0.21
CCDC78-216ENST00000544996 DDI1Q8WTU0 396 aa16.39■□□□□ 0.21
CCDC78-216ENST00000544996 SPAG5Q96R06 1193 aa16.39■□□□□ 0.21
CCDC78-216ENST00000544996 GANQ9H2C0 597 aa16.39■□□□□ 0.21
CCDC78-216ENST00000544996 PLK2Q9NYY3 685 aa16.39■□□□□ 0.21
CCDC78-216ENST00000544996 SIK3Q9Y2K2 1263 aa16.39■□□□□ 0.21
CCDC78-216ENST00000544996 APBB3O95704 486 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 PENKP01210 267 aaPredicted RBP16.38■□□□□ 0.21
CCDC78-216ENST00000544996 IGLV3-27P01718 113 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 FYNP06241 537 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 GLI1P08151 1106 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 ATP1A3P13637 1013 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 DMWDQ09019 674 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 MPPE1Q53F39 396 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 EOGTQ5NDL2 527 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 TAF3Q5VWG9 929 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 FYB2Q5VWT5 728 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 TOGARAM2Q6ZUX3 1019 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 WDR5BQ86VZ2 330 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 SFTPA1Q8IWL2 248 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 DHX40Q8IX18 779 aaKnown RBP16.38■□□□□ 0.21
CCDC78-216ENST00000544996 FAM217AQ8IXS0 508 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 CCDC33Q8N5R6 958 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 ALLCQ8N6M5 410 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 HHIPQ96QV1 700 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 ERGIC2Q96RQ1 377 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 HSD3B7Q9H2F3 369 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 EPC1Q9H2F5 836 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 NLRC4Q9NPP4 1024 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 ASNSD1Q9NWL6 643 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 STOML2Q9UJZ1 356 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 RAB23Q9ULC3 237 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 MMP17Q9ULZ9 603 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 TLR6Q9Y2C9 796 aa16.38■□□□□ 0.21
CCDC78-216ENST00000544996 SYCE3A1L190 88 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 HSF2BPO75031 334 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 GFPT2O94808 682 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 KLF8O95600 359 aaPredicted RBP16.37■□□□□ 0.21
CCDC78-216ENST00000544996 LSM8O95777 96 aaKnown RBP16.37■□□□□ 0.21
CCDC78-216ENST00000544996 SOX5P35711 763 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 STAT1P42224 750 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 KIR2DL1P43626 348 aaPredicted RBP16.37■□□□□ 0.21
CCDC78-216ENST00000544996 PXNP49023 591 aaPredicted RBP16.37■□□□□ 0.21
CCDC78-216ENST00000544996 DGKEP52429 567 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 SKOR2Q2VWA4 1001 aaPredicted RBP16.37■□□□□ 0.21
CCDC78-216ENST00000544996 FILIP1LQ4L180 1135 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 DCAF6Q58WW2 860 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 EMC10Q5UCC4 262 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 SYPL2Q5VXT5 272 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 OR6B2Q6IFH4 312 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 ZNF677Q86XU0 584 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 ZDHHC17Q8IUH5 632 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 ZNF513Q8N8E2 541 aaPredicted RBP16.37■□□□□ 0.21
CCDC78-216ENST00000544996 IL17RCQ8NAC3 791 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 SUMF1Q8NBK3 374 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 TXNDC5Q8NBS9 432 aaKnown RBP16.37■□□□□ 0.21
CCDC78-216ENST00000544996 MSANTD4Q8NCY6 345 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 TSTD1Q8NFU3 115 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 AZIN2Q96A70 460 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 TMA16Q96EY4 203 aaKnown RBP16.37■□□□□ 0.21
CCDC78-216ENST00000544996 DDX50Q9BQ39 737 aaKnown RBP16.37■□□□□ 0.21
CCDC78-216ENST00000544996 HINFPQ9BQA5 517 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 SLC2A11Q9BYW1 496 aa16.37■□□□□ 0.21
CCDC78-216ENST00000544996 POLR3BQ9NW08 1133 aaPredicted RBP16.37■□□□□ 0.21
CCDC78-216ENST00000544996 TRIM24O15164 1050 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 ALDH1A2O94788 518 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 APOEP02649 317 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 ERBB2P04626 1255 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 GBP1P32455 592 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 CDH5P33151 784 aaPredicted RBP16.36■□□□□ 0.21
CCDC78-216ENST00000544996 JAM2P57087 298 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 TPM4P67936 248 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 CDK17Q00537 523 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 SLC6A3Q01959 620 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 SIM2Q14190 667 aaPredicted RBP16.36■□□□□ 0.21
CCDC78-216ENST00000544996 TAF5Q15542 800 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 CRY1Q16526 586 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 PTPN20Q4JDL3 420 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 SDE2Q6IQ49 451 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 FAM183BPQ6ZVS7 135 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 APTXQ7Z2E3 356 aaKnown RBP16.36■□□□□ 0.21
CCDC78-216ENST00000544996 NOP9Q86U38 636 aaKnown RBP16.36■□□□□ 0.21
CCDC78-216ENST00000544996 ERICH1Q86X53 443 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 ADAM32Q8TC27 787 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 EPS8L1Q8TE68 723 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 DDX1Q92499 740 aaKnown RBP16.36■□□□□ 0.21
CCDC78-216ENST00000544996 RUBCNQ92622 972 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 FUCA2Q9BTY2 467 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 IRX2Q9BZI1 471 aaPredicted RBP16.36■□□□□ 0.21
CCDC78-216ENST00000544996 POLMQ9NP87 494 aaPredicted RBP16.36■□□□□ 0.21
CCDC78-216ENST00000544996 TJP2Q9UDY2 1190 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 EBF1Q9UH73 591 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 FBXO10Q9UK96 956 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 SMG5Q9UPR3 1016 aaKnown RBP16.36■□□□□ 0.21
CCDC78-216ENST00000544996 SLC27A6Q9Y2P4 619 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 STARD13Q9Y3M8 1113 aa16.36■□□□□ 0.21
CCDC78-216ENST00000544996 PIEZO1Q92508 2521 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms