RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 CACNA2D4Q7Z3S7 1137 aa24.26■■□□□ 1.47
CHFR-222ENST00000544093 C11orf74Q86VG3 221 aa24.26■■□□□ 1.47
CHFR-222ENST00000544093 RASSF3Q86WH2 238 aa24.26■■□□□ 1.47
CHFR-222ENST00000544093 FAM71AQ8IYT1 594 aa24.26■■□□□ 1.47
CHFR-222ENST00000544093 CCDC33Q8N5R6 958 aa24.26■■□□□ 1.47
CHFR-222ENST00000544093 CLEC4CQ8WTT0 213 aa24.26■■□□□ 1.47
CHFR-222ENST00000544093 FAM149B1Q96BN6 582 aa24.26■■□□□ 1.47
CHFR-222ENST00000544093 SERPINB11Q96P15 392 aa24.26■■□□□ 1.47
CHFR-222ENST00000544093 ACP6Q9NPH0 428 aa24.26■■□□□ 1.47
CHFR-222ENST00000544093 EML5Q05BV3 1969 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 FOXN3O00409 490 aaPredicted RBP24.25■■□□□ 1.47
CHFR-222ENST00000544093 IGLV3-27P01718 113 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 SLC11A2P49281 568 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 MYL5Q02045 173 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 MPPE1Q53F39 396 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 FKBP15Q5T1M5 1219 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 SDE2Q6IQ49 451 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 SFTPA1Q8IWL2 248 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 DDI1Q8WTU0 396 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 AZIN2Q96A70 460 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 LOXL4Q96JB6 756 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 PLCB1Q9NQ66 1216 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 DAAM1Q9Y4D1 1078 aa24.25■■□□□ 1.47
CHFR-222ENST00000544093 E5RJQ4 531 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 SGK1O00141 431 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 CAPN9O14815 690 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 NPC1O15118 1278 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 CISD3P0C7P0 127 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 UCHL3P15374 230 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 KCNMA1Q12791 1236 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 SRSF5Q13243 272 aaKnown RBP24.24■■□□□ 1.47
CHFR-222ENST00000544093 RAPGEF1Q13905 1077 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 USP39Q53GS9 565 aaKnown RBP24.24■■□□□ 1.47
CHFR-222ENST00000544093 DPY19L2P1Q6NXN4 242 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 BHMTQ93088 406 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 NAT10Q9H0A0 1025 aaKnown RBP24.24■■□□□ 1.47
CHFR-222ENST00000544093 POPDC2Q9HBU9 364 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 POLR3BQ9NW08 1133 aaPredicted RBP24.24■■□□□ 1.47
CHFR-222ENST00000544093 TAB2Q9NYJ8 693 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 PLK2Q9NYY3 685 aa24.24■■□□□ 1.47
CHFR-222ENST00000544093 SPTBN4Q9H254 2564 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 IRAK2O43187 625 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 PAPSS1O43252 624 aaPredicted RBP24.23■■□□□ 1.47
CHFR-222ENST00000544093 MSI1O43347 362 aaKnown RBP24.23■■□□□ 1.47
CHFR-222ENST00000544093 FOXD2O60548 495 aaPredicted RBP24.23■■□□□ 1.47
CHFR-222ENST00000544093 GLI1P08151 1106 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 NTSR1P30989 418 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 CLCN1P35523 988 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 TBX4P57082 545 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 YWHAZP63104 245 aaKnown RBP24.23■■□□□ 1.47
CHFR-222ENST00000544093 DRAP1Q14919 205 aaPredicted RBP24.23■■□□□ 1.47
CHFR-222ENST00000544093 KRT31Q15323 416 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 EMC10Q5UCC4 262 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 DCLK2Q8N568 766 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 ZC3H10Q96K80 434 aaKnown RBP24.23■■□□□ 1.47
CHFR-222ENST00000544093 PPP1R13BQ96KQ4 1090 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 DDX50Q9BQ39 737 aaKnown RBP24.23■■□□□ 1.47
CHFR-222ENST00000544093 LSM14BQ9BX40 385 aaKnown RBP24.23■■□□□ 1.47
CHFR-222ENST00000544093 FANCLQ9NW38 375 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 ASNSD1Q9NWL6 643 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 CYTH4Q9UIA0 394 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 AJAP1Q9UKB5 411 aaPredicted RBP24.23■■□□□ 1.47
CHFR-222ENST00000544093 TLR6Q9Y2C9 796 aa24.23■■□□□ 1.47
CHFR-222ENST00000544093 TRIM24O15164 1050 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 ADAM23O75077 832 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 FYNP06241 537 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 HOXC13P31276 330 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 LPAL2Q16609 132 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 EFHC1Q5JVL4 640 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 ANO7Q6IWH7 933 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 C11orf57Q6ZUT1 292 aaPredicted RBP24.22■■□□□ 1.47
CHFR-222ENST00000544093 TOGARAM2Q6ZUX3 1019 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 SLC47A2Q86VL8 602 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 KIAA2013Q8IYS2 634 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 FAM160A2Q8N612 972 aaPredicted RBP24.22■■□□□ 1.47
CHFR-222ENST00000544093 ZNF557Q8N988 423 aaPredicted RBP24.22■■□□□ 1.47
CHFR-222ENST00000544093 DQX1Q8TE96 717 aaKnown RBP24.22■■□□□ 1.47
CHFR-222ENST00000544093 UCMAQ8WVF2 138 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 NAA15Q9BXJ9 866 aaKnown RBP24.22■■□□□ 1.47
CHFR-222ENST00000544093 STK33Q9BYT3 514 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 FHOD1Q9Y613 1164 aa24.22■■□□□ 1.47
CHFR-222ENST00000544093 GFRA2O00451 464 aa24.21■■□□□ 1.47
CHFR-222ENST00000544093 ZBTB24O43167 697 aaPredicted RBP24.21■■□□□ 1.47
CHFR-222ENST00000544093 HNRNPLP14866 589 aaKnown RBP eCLIP24.21■■□□□ 1.47
CHFR-222ENST00000544093 BYSLQ13895 437 aaKnown RBP24.21■■□□□ 1.47
CHFR-222ENST00000544093 EIF4HQ15056 248 aaKnown RBP24.21■■□□□ 1.47
CHFR-222ENST00000544093 MPP7Q5T2T1 576 aa24.21■■□□□ 1.47
CHFR-222ENST00000544093 TMEM92Q6UXU6 159 aa24.21■■□□□ 1.47
CHFR-222ENST00000544093 ANKS1BQ7Z6G8 1248 aa24.21■■□□□ 1.47
CHFR-222ENST00000544093 ZDHHC17Q8IUH5 632 aa24.21■■□□□ 1.47
CHFR-222ENST00000544093 CHPFQ8IZ52 775 aa24.21■■□□□ 1.47
CHFR-222ENST00000544093 MDGA1Q8NFP4 955 aa24.21■■□□□ 1.47
CHFR-222ENST00000544093 IPO4Q8TEX9 1081 aaKnown RBP24.21■■□□□ 1.47
CHFR-222ENST00000544093 TMA16Q96EY4 203 aaKnown RBP24.21■■□□□ 1.47
CHFR-222ENST00000544093 VPS16Q9H269 839 aa24.21■■□□□ 1.47
CHFR-222ENST00000544093 PDCL3Q9H2J4 239 aa24.21■■□□□ 1.47
CHFR-222ENST00000544093 NAALADL1Q9UQQ1 740 aa24.21■■□□□ 1.47
CHFR-222ENST00000544093 RALGAPA1Q6GYQ0 2036 aa24.2■■□□□ 1.47
CHFR-222ENST00000544093 PRRT4C9JH25 899 aa24.2■■□□□ 1.46
CHFR-222ENST00000544093 HSF2BPO75031 334 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms