RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CHKAP35790 457 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 ATP5OP48047 213 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 NR2C2P49116 596 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 PGFP49763 221 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 DEFB103AP81534 67 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 EIF4EBP2Q13542 120 aaPredicted RBP20.56■□□□□ 0.88
COPS7A-218ENST00000543939 BTBD8Q5XKL5 378 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 NCBP2-AS2Q69YL0 99 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 MFSD5Q6N075 450 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 PRSS55Q6UWB4 352 aaPredicted RBP20.56■□□□□ 0.88
COPS7A-218ENST00000543939 RNF19BQ6ZMZ0 732 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 FAM71DQ8N9W8 422 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 PABPC3Q9H361 631 aaKnown RBP20.56■□□□□ 0.88
COPS7A-218ENST00000543939 ARHGEF4Q9NR80 690 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 TPX2Q9ULW0 747 aaKnown RBP20.56■□□□□ 0.88
COPS7A-218ENST00000543939 RAG1P15918 1043 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 RPL22P35268 128 aaKnown RBP20.56■□□□□ 0.88
COPS7A-218ENST00000543939 SLC10A2Q12908 348 aaPredicted RBP20.56■□□□□ 0.88
COPS7A-218ENST00000543939 SEMA3BQ13214 749 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 USP41Q3LFD5 358 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 C2orf15Q8WU43 125 aaKnown RBP20.56■□□□□ 0.88
COPS7A-218ENST00000543939 FBXO44Q9H4M3 255 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 WDCPQ9H6R7 721 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 NMUR1Q9HB89 426 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 USP29Q9HBJ7 922 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 ETNK2Q9NVF9 386 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 MTRRQ9UBK8 725 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 BCLAF3A2AJT9 711 aaKnown RBP20.55■□□□□ 0.88
COPS7A-218ENST00000543939 NDC80O14777 642 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 POLR3GO15318 223 aaPredicted RBP20.55■□□□□ 0.88
COPS7A-218ENST00000543939 EFCAB14O75071 495 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 RNF40O75150 1001 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 CTCFP49711 727 aaPredicted RBP20.55■□□□□ 0.88
COPS7A-218ENST00000543939 WDR5P61964 334 aaKnown RBP20.55■□□□□ 0.88
COPS7A-218ENST00000543939 GBE1Q04446 702 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 XRCC4Q13426 336 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 ARL13BQ3SXY8 428 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 RNASEH2BQ5TBB1 312 aaKnown RBP20.55■□□□□ 0.88
COPS7A-218ENST00000543939 KCNT2Q6UVM3 1135 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 B4GALNT4Q76KP1 1039 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 MON1AQ86VX9 555 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 STKLD1Q8NE28 680 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 RTP4Q96DX8 246 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 TMEM106CQ9BVX2 250 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 FOXP3Q9BZS1 431 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 CRISPLD1Q9H336 500 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 SEMA4AQ9H3S1 761 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 SMOC2Q9H3U7 446 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 PTPRSQ13332 1948 aa20.55■□□□□ 0.88
COPS7A-218ENST00000543939 A0A1W2PQH9 124 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 FAM92AA1XBS5 289 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 CFAP69A5D8W1 941 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 IRAK2O43187 625 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 HAPLN1P10915 354 aaPredicted RBP20.54■□□□□ 0.88
COPS7A-218ENST00000543939 USP46P62068 366 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 DPYSQ14117 519 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 MORF4L2Q15014 288 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 TMCO2Q7Z6W1 182 aaPredicted RBP20.54■□□□□ 0.88
COPS7A-218ENST00000543939 CCDC25Q86WR0 208 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 TMEM199Q8N511 208 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 ZCCHC9Q8N567 271 aaKnown RBP20.54■□□□□ 0.88
COPS7A-218ENST00000543939 SPATA17Q96L03 361 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 SLC27A5Q9Y2P5 690 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 MFHAS1Q9Y4C4 1052 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 BACE2Q9Y5Z0 518 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 CDY1Q9Y6F8 540 aa20.54■□□□□ 0.88
COPS7A-218ENST00000543939 FAM72CH0Y354 149 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 EEF2KO00418 725 aaKnown RBP20.53■□□□□ 0.88
COPS7A-218ENST00000543939 CREB3O43889 395 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 NUDT17P0C025 328 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 HCAR3P49019 387 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 FAM72AQ5TYM5 149 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 SLC8B1Q6J4K2 584 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 FAM72DQ6L9T8 149 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 RFX8Q6ZV50 586 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 FAM72BQ86X60 149 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 GOLGA6L1Q8N7Z2 621 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 FBXO22Q8NEZ5 403 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 OR2W6PQ8NHA6 318 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 TKTL2Q9H0I9 626 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 OSER1Q9NX31 292 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 DTLQ9NZJ0 730 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 FARP1Q9Y4F1 1045 aaPredicted RBP20.53■□□□□ 0.88
COPS7A-218ENST00000543939 GOLGA8KD6RF30 607 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 ADAM12O43184 909 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 SOAT2O75908 522 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 MAP3K6O95382 1288 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 RBL1P28749 1068 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 ZNF844Q08AG5 666 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 PSMD5Q16401 504 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 MGAT5BQ3V5L5 792 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 FAM117BQ6P1L5 589 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 TRMT10CQ7L0Y3 403 aaKnown RBP20.53■□□□□ 0.88
COPS7A-218ENST00000543939 PCGF5Q86SE9 256 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 CDKL3Q8IVW4 592 aaPredicted RBP20.53■□□□□ 0.88
COPS7A-218ENST00000543939 CMTR2Q8IYT2 770 aaKnown RBP20.53■□□□□ 0.88
COPS7A-218ENST00000543939 SLC39A11Q8N1S5 342 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 ARHGAP18Q8N392 663 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 CASP10Q92851 521 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 ARL8AQ96BM9 186 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms