RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 GPBP1L1Q9HC44 474 aaPredicted RBP8.84□□□□□ -0.99
ABCB1-210ENST00000543898 TCF7L2Q9NQB0 619 aa8.84□□□□□ -0.99
ABCB1-210ENST00000543898 POLIQ9UNA4 740 aa8.84□□□□□ -0.99
ABCB1-210ENST00000543898 POMPQ9Y244 141 aa8.84□□□□□ -0.99
ABCB1-210ENST00000543898 COQ4Q9Y3A0 265 aa8.84□□□□□ -0.99
ABCB1-210ENST00000543898 ZNF142P52746 1687 aaPredicted RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 TPP1O14773 563 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 TP73O15350 636 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 CST3P01034 146 aaPredicted RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 MYCLP1P12525 358 aaPredicted RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 CASP2P42575 452 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 OGDHQ02218 1023 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 XKR3Q5GH77 459 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 SNRNP48Q6IEG0 339 aaKnown RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 TRMT10BQ6PF06 316 aaKnown RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 ZNF354CQ86Y25 554 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 C10orf107Q8IVU9 208 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 AFAP1L2Q8N4X5 818 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 NAT8LQ8N9F0 302 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 DIS3LQ8TF46 1054 aaKnown RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 CGRRF1Q99675 332 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 KANSL3Q9P2N6 904 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 TDRKHQ9Y2W6 561 aaKnown RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 PARP4Q9UKK3 1724 aaKnown RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 PLIN4Q96Q06 1357 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 SORBS2O94875 1100 aaKnown RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 COX4I1P13073 169 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 MAPK10P53779 464 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 WASHC5Q12768 1159 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 PDK1Q15118 436 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 CYP2R1Q6VVX0 501 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 C15orf52Q6ZUT6 534 aaKnown RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 AMIGO2Q86SJ2 522 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 SIAH1Q8IUQ4 282 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 IQCF2Q8IXL9 164 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 PQLC1Q8N2U9 271 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 RNF34Q969K3 372 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 NDEL1Q9GZM8 345 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 TLE6Q9H808 572 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 C17orf75Q9HAS0 396 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 IL1RL2Q9HB29 575 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 DCDC2Q9UHG0 476 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 TRPC5Q9UL62 973 aaPredicted RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 DCCP43146 1447 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 GRIN3BO60391 1043 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 LRCH4O75427 683 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 ICAM1P05362 532 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 MLH1P40692 756 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 STRIP1Q5VSL9 837 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 FOXB2Q5VYV0 432 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 CLVS1Q8IUQ0 354 aaPredicted RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 TDRD5Q8NAT2 981 aaKnown RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 NSUN6Q8TEA1 469 aaKnown RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 ZNF669Q96BR6 464 aaPredicted RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 ZFRQ96KR1 1074 aaKnown RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 MRPL4Q9BYD3 311 aaKnown RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 GCOM2Q9BZD3 368 aaPredicted RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 ILKAPQ9H0C8 392 aaPredicted RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 MRPL46Q9H2W6 279 aaKnown RBP8.83□□□□□ -1
ABCB1-210ENST00000543898 TBC1D23Q9NUY8 699 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 SLC39A10Q9ULF5 831 aa8.83□□□□□ -1
ABCB1-210ENST00000543898 ITM2AO43736 263 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 LSM8O95777 96 aaKnown RBP8.82□□□□□ -1
ABCB1-210ENST00000543898 GRK2P25098 689 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 SH3BP5LQ7L8J4 393 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 AMIGO3Q86WK7 504 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 LRRC71Q8N4P6 559 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 SLC35B2Q8TB61 432 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 WDR55Q9H6Y2 383 aaPredicted RBP8.82□□□□□ -1
ABCB1-210ENST00000543898 TJP2Q9UDY2 1190 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 CNTNAP2Q9UHC6 1331 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 MT-CO1P00395 513 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 TNFSF9P41273 254 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 SNX16P57768 344 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 SPP2Q13103 211 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 ZBTB17Q13105 803 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 CTC1Q2NKJ3 1217 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 NADK2Q4G0N4 442 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 CMPK2Q5EBM0 449 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 PPM1JQ5JR12 505 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 ANGEL2Q5VTE6 544 aaKnown RBP8.82□□□□□ -1
ABCB1-210ENST00000543898 UNC5AQ6ZN44 842 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 IFNEQ86WN2 208 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 FBXW8Q8N3Y1 598 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 CYGBQ8WWM9 190 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 PDCD2LQ9BRP1 358 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 FRMD8P1Q9BZ68 369 aaPredicted RBP8.82□□□□□ -1
ABCB1-210ENST00000543898 KCNK13Q9HB14 408 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 BFARQ9NZS9 450 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 WARS2Q9UGM6 360 aaKnown RBP8.82□□□□□ -1
ABCB1-210ENST00000543898 ADAMTS6Q9UKP5 1117 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 GNEQ9Y223 722 aaKnown RBP8.82□□□□□ -1
ABCB1-210ENST00000543898 PHRF1Q9P1Y6 1649 aaKnown RBP8.82□□□□□ -1
ABCB1-210ENST00000543898 CRCPO75575 148 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 MMP10P09238 476 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 ERVK-10P10266 1014 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 CRABP2P29373 138 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 JAG1P78504 1218 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 PTPN20Q4JDL3 420 aa8.82□□□□□ -1
ABCB1-210ENST00000543898 DRICH1Q6PGQ1 229 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms