RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 MBL2P11226 248 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 IFNGR2P38484 337 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 RPL3P39023 403 aaKnown RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 THOP1P52888 689 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 TBX2Q13207 712 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 LRRC38Q5VT99 294 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 CDC42EP5Q6NZY7 148 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 MPZL3Q6UWV2 235 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 PI16Q6UXB8 463 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 OTOP2Q7RTS6 562 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 SLC26A11Q86WA9 606 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 PHF21AQ96BD5 680 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 PPP1R14BQ96C90 147 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 WDR24Q96S15 920 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 UGT2B28Q9BY64 529 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 YIPF3Q9GZM5 350 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 UNC45AQ9H3U1 944 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 PARVBQ9HBI1 364 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 HPS5Q9UPZ3 1129 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 HEY1Q9Y5J3 304 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 AK5Q9Y6K8 562 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 TRIM24O15164 1050 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 BIRC5O15392 142 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 VIL1P09327 827 aaKnown RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 PSMC3P17980 439 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 RFX5P48382 616 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 DHPSP49366 369 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 HPCAP84074 193 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 ZNF268Q14587 947 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 C1orf54Q8WWF1 131 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 GPR88Q9GZN0 384 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 KCNK4Q9NYG8 393 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 COPG2Q9UBF2 871 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 ZNF229Q9UJW7 825 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 LTBP3Q9NS15 1303 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 PDE2AO00408 941 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 TNFAIP8O95379 198 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 ATP6V1G2O95670 118 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 HLA-DRAP01903 254 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 PDHBP11177 359 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 CYP11B2P19099 503 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 COMTP21964 271 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 PON1P27169 355 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 CCT8P50990 548 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 BCAT1P54687 386 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 SKP1P63208 163 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 FMR1Q06787 632 aaKnown RBP eCLIP8.03□□□□□ -1.122e-6■■■□□ 17.1
VPS13D-211ENST00000543710 TRIP4Q15650 581 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 CTXN3Q4LDR2 81 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 USP39Q53GS9 565 aaKnown RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 PRR23CQ6ZRP0 262 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 GPR142Q7Z601 462 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 TMPRSS6Q8IU80 811 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 ST13P5Q8NFI4 369 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 NPHS2Q9NP85 383 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 C20orf96Q9NUD7 363 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 KBTBD4Q9NVX7 518 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 CAB39Q9Y376 341 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 FIS1Q9Y3D6 152 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 CHADO15335 359 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 PROSCO94903 275 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 KRT75O95678 551 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 APODP05090 189 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 SCTRP47872 440 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 VCPP55072 806 aaKnown RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 RAB14P61106 215 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 PID1Q7Z2X4 250 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 SNX31Q8N9S9 440 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 ZNF507Q8TCN5 953 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 ZDHHC15Q96MV8 337 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 MCEEQ96PE7 176 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 CINPQ9BW66 212 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 CYP4F11Q9HBI6 524 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 CD274Q9NZQ7 290 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 AMACRQ9UHK6 382 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 NR3C2P08235 984 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 BNC1Q01954 994 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 ZNF410Q86VK4 478 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 EID3Q8N140 333 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 CCNYL1Q8N7R7 359 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 PDPRQ8NCN5 879 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 ACMSDQ8TDX5 336 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 AENQ8WTP8 325 aaKnown RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 FAXDC2Q96IV6 333 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 ZNF333Q96JL9 665 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 CATSPER2Q96P56 530 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 C9orf16Q9BUW7 83 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 NMRAL1Q9HBL8 299 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 CASS4Q9NQ75 786 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 KCNQ5Q9NR82 932 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 NDFIP2Q9NV92 336 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 SAE1Q9UBE0 346 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-211ENST00000543710 SLC30A1Q9Y6M5 507 aa8.03□□□□□ -1.12
VPS13D-211ENST00000543710 KRT87PA6NCN2 255 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PHF20L1A8MW92 1017 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 SEPT4O43236 478 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 VPS26AO75436 327 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 KITP10721 976 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PRKAA1Q13131 559 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 CNGA2Q16280 664 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms