RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 GTF2IRD1Q9UHL9 959 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 BARX2Q9UMQ3 279 aaPredicted RBP14.19□□□□□ -0.14
VPS33A-208ENST00000543633 HMX2A2RU54 273 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 ANKRD33BA6NCL7 494 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 SRGAP2CP0DJJ0 459 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 CXCL8P10145 99 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 MCF2P10911 925 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 PRDX6P30041 224 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 CDH8P55286 799 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 KDSRQ06136 332 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 POU5F1BQ06416 359 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 CDC16Q13042 620 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 DYNC1I2Q13409 638 aaKnown RBP14.18□□□□□ -0.14
VPS33A-208ENST00000543633 BMPR2Q13873 1038 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 FAM187BQ17R55 369 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 EFHC1Q5JVL4 640 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 RNF220Q5VTB9 566 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 MBLAC2Q68D91 279 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 OR6B2Q6IFH4 312 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 EP400NLQ6ZTU2 488 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 HACE1Q8IYU2 909 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 PCDH19Q8TAB3 1148 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 ATP2A3Q93084 1043 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 RILPQ96NA2 401 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 OLFM3Q96PB7 478 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 QKIQ96PU8 341 aaKnown RBP eCLIP14.18□□□□□ -0.14
VPS33A-208ENST00000543633 SLC4A7Q9Y6M7 1214 aa14.18□□□□□ -0.14
VPS33A-208ENST00000543633 A0A088AWK7 358 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 CCDC195A0A1B0GUA6 201 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 ZBTB42B2RXF5 422 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 BUD23O43709 281 aaKnown RBP14.17□□□□□ -0.14
VPS33A-208ENST00000543633 NFICP08651 508 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 FDFT1P37268 417 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 SLC26A2P50443 739 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 RAB27AP51159 221 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 ALDH18A1P54886 795 aaKnown RBP14.17□□□□□ -0.14
VPS33A-208ENST00000543633 CCDC14Q49A88 953 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 DHDDSQ86SQ9 333 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 ZDHHC17Q8IUH5 632 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 FBXO27Q8NI29 283 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 PIP4K2CQ8TBX8 421 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 FAM172AQ8WUF8 416 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 NCSTNQ92542 709 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 NAT9Q9BTE0 207 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 SNRNP25Q9BV90 132 aaKnown RBP14.17□□□□□ -0.14
VPS33A-208ENST00000543633 TRIM4Q9C037 500 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 S100A14Q9HCY8 104 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 EIF2B3Q9NR50 452 aaKnown RBP14.17□□□□□ -0.14
VPS33A-208ENST00000543633 PRMT7Q9NVM4 692 aaPredicted RBP14.17□□□□□ -0.14
VPS33A-208ENST00000543633 HMGXB4Q9UGU5 601 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 HACD1B0YJ81 288 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 CYB561D2O14569 222 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 MAP3K13O43283 966 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 ZNF189O75820 626 aaPredicted RBP14.17□□□□□ -0.14
VPS33A-208ENST00000543633 ITGB3P05106 788 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 SERPINE1P05121 402 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 CCDC130P13994 396 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 SDC4P31431 198 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 SCNN1AP37088 669 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 CLCN2P51788 898 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 MBTD1Q05BQ5 628 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 NIPAL4Q0D2K0 466 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 DPYSL2Q16555 572 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 C15orf59Q2T9L4 293 aaPredicted RBP14.17□□□□□ -0.14
VPS33A-208ENST00000543633 FASTKD1Q53R41 847 aaKnown RBP14.17□□□□□ -0.14
VPS33A-208ENST00000543633 SH3D19Q5HYK7 790 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 NOL9Q5SY16 702 aaKnown RBP14.17□□□□□ -0.14
VPS33A-208ENST00000543633 TEDDM1Q5T9Z0 273 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 NBPF12Q5TAG4 269 aaPredicted RBP14.17□□□□□ -0.14
VPS33A-208ENST00000543633 FOXB2Q5VYV0 432 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 EEF1DP3Q658K8 133 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 OLFML1Q6UWY5 402 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 NT5DC4Q86YG4 428 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 ADGRF2Q8IZF7 708 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 CCDC33Q8N5R6 958 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 PPP1R14CQ8TAE6 165 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 CDKL2Q92772 493 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 HEXIM2Q96MH2 286 aaKnown RBP14.17□□□□□ -0.14
VPS33A-208ENST00000543633 WRNIP1Q96S55 665 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 NRDE2Q9H7Z3 1164 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 MORF4L1Q9UBU8 362 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 DCDC2Q9UHG0 476 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 APOBEC2Q9Y235 224 aaKnown RBP14.17□□□□□ -0.14
VPS33A-208ENST00000543633 TBC1D30Q9Y2I9 924 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 AFG3L2Q9Y4W6 797 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 HEY1Q9Y5J3 304 aa14.17□□□□□ -0.14
VPS33A-208ENST00000543633 PLXNA1Q9UIW2 1896 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 UGT1A9O60656 530 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 PLIN3O60664 434 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 GSRP00390 522 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 FGF3P11487 239 aaPredicted RBP14.16□□□□□ -0.14
VPS33A-208ENST00000543633 PTPN9P43378 593 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 CDK7P50613 346 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 COPAP53621 1224 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 SH3PXD2AQ5TCZ1 1133 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 FAXCQ5TGI0 409 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 PGM2L1Q6PCE3 622 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 APOBEC3FQ8IUX4 373 aaKnown RBP14.16□□□□□ -0.14
VPS33A-208ENST00000543633 OR6Y1Q8NGX8 325 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms