RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 FLT3P36888 993 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 SSR1P43307 286 aaKnown RBP6.57□□□□□ -1.36
LTBR-212ENST00000543542 MAGEA1P43355 309 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 GALCP54803 685 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 NAP1L1P55209 391 aaKnown RBP6.57□□□□□ -1.36
LTBR-212ENST00000543542 GSCP56915 257 aaPredicted RBP6.57□□□□□ -1.36
LTBR-212ENST00000543542 ZXDAP98168 799 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 ZXDBP98169 803 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 AMPD2Q01433 879 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 FCHO2Q0JRZ9 810 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 PTP4A2Q12974 167 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 RUNX3Q13761 415 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 C15orf59Q2T9L4 293 aaPredicted RBP6.57□□□□□ -1.36
LTBR-212ENST00000543542 ITPRIPL2Q3MIP1 535 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 SLC25A52Q3SY17 297 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 ZC3H12AQ5D1E8 599 aaKnown RBP6.57□□□□□ -1.36
LTBR-212ENST00000543542 C10orf76Q5T2E6 689 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 SCYL2Q6P3W7 929 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 TPGS1Q6ZTW0 290 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 KIAA1328Q86T90 577 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 CCDC117Q8IWD4 279 aaPredicted RBP6.57□□□□□ -1.36
LTBR-212ENST00000543542 BBS7Q8IWZ6 715 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 FAM172AQ8WUF8 416 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 EXOC4Q96A65 974 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 LRRC3BQ96PB8 259 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 TBCBQ99426 244 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 DDX50Q9BQ39 737 aaKnown RBP6.57□□□□□ -1.36
LTBR-212ENST00000543542 DDX23Q9BUQ8 820 aaKnown RBP6.57□□□□□ -1.36
LTBR-212ENST00000543542 NUP85Q9BW27 656 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 THAP2Q9H0W7 228 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 LINC00597Q9H2U6 94 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 WDCPQ9H6R7 721 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.57□□□□□ -1.36
LTBR-212ENST00000543542 TMEM59LQ9UK28 342 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 TLR6Q9Y2C9 796 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 BRWD1Q9NSI6 2320 aa6.57□□□□□ -1.36
LTBR-212ENST00000543542 KIF26AQ9ULI4 1882 aaPredicted RBP6.57□□□□□ -1.36
LTBR-212ENST00000543542 C2CD4BA6NLJ0 364 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 TMEM110-MUSTN1A8MSY1 372 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 EIF3CLB5ME19 914 aaKnown RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 NEDD8-MDP1E9PL57 170 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 TRDMT1O14717 391 aaKnown RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 IRAK2O43187 625 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 CCP110O43303 1012 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 ACSL4O60488 711 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 TSPAN3O60637 253 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 NDUFA10O95299 355 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 TMEM253P0C7T8 217 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 RDXP35241 583 aaKnown RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 NOP2P46087 812 aaKnown RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 VCPP55072 806 aaKnown RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 RPL7AP62424 266 aaKnown RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 PITX1P78337 314 aaPredicted RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 KRT83P78385 493 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 GAD2Q05329 585 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 RING1Q06587 406 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 TNK2Q07912 1038 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 NNTQ13423 1086 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 MAMLD1Q13495 774 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 MLF2Q15773 248 aaPredicted RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 EML3Q32P44 896 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 ARL13BQ3SXY8 428 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 SLC44A4Q53GD3 710 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 ZFYVE27Q5T4F4 411 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 RAP1GAP2Q684P5 730 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 PLEKHA7Q6IQ23 1121 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 TPRG1Q6ZUI0 275 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 HTR3DQ70Z44 454 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 ARCQ7LC44 396 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 CHSY1Q86X52 802 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 FAM131BQ86XD5 332 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 SIX5Q8N196 739 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 TXLNBQ8N3L3 684 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 CCDC112Q8NEF3 446 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 RIN3Q8TB24 985 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 ZNF564Q8TBZ8 553 aaPredicted RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 DDI1Q8WTU0 396 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 EDAQ92838 391 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 DNASE1L2Q92874 299 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 KHSRPQ92945 711 aaKnown RBP eCLIP6.56□□□□□ -1.36
LTBR-212ENST00000543542 BHMTQ93088 406 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 WBP2Q969T9 261 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 OTUB2Q96DC9 234 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 SHDQ96IW2 340 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 ZFRQ96KR1 1074 aaKnown RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 BTN2A3PQ96KV6 586 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 FCRL2Q96LA5 508 aaPredicted RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 XPO6Q96QU8 1125 aaKnown RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 NPY6RQ99463 290 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 EIF3CQ99613 913 aaKnown RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 BBS2Q9BXC9 721 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 COL25A1Q9BXS0 654 aaPredicted RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 PACSIN1Q9BY11 444 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 TKTL2Q9H0I9 626 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 SIK2Q9H0K1 926 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 ECT2Q9H8V3 914 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 SLC2A4RGQ9NR83 387 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 SPHK2Q9NRA0 654 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 HEBP1Q9NRV9 189 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 PIGVQ9NUD9 493 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms