RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 HSDL1Q3SXM5 330 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ERMARDQ5T6L9 678 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 RD3Q7Z3Z2 195 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 JAZF1Q86VZ6 243 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SCUBE3Q8IX30 993 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 C7orf61Q8IZ16 206 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 DEFB106AQ8N104 65 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC20A1Q8WUM9 679 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC35C1Q96A29 364 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ULBP1Q9BZM6 244 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ZCCHC2Q9C0B9 1178 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 POPDC2Q9HBU9 364 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ALG13Q9NP73 1137 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ABCC13Q9NSE7 274 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 NDE1Q9NXR1 346 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 DDX20Q9UHI6 824 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ASTN2O75129 1339 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 LRRIQ3A6PVS8 624 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 IFRD1O00458 451 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 GLUD1P00367 558 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CCDC130P13994 396 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 GRK3P35626 688 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CARSP49589 748 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 RAP1GDS1P52306 607 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 TPGS1Q6ZTW0 290 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 OTOP2Q7RTS6 562 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ADAM32Q8TC27 787 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CELF6Q96J87 481 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 LRRC37BQ96QE4 947 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ERP44Q9BS26 406 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 C1QTNF7Q9BXJ2 289 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SPG21Q9NZD8 308 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 PRELID1Q9Y255 219 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 MEFVO15553 781 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 ZW10O43264 779 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 CCDC22O60826 627 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 CXCL14O95715 111 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 USP17L7P0C7H9 530 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 SP100P23497 879 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 CHKAP35790 457 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 SGO1Q5FBB7 561 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 KCNK18Q7Z418 384 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 RBM23Q86U06 439 aaKnown RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 PHC3Q8NDX5 983 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 LPCAT1Q8NF37 534 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 PAWRQ96IZ0 340 aaKnown RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 APOL2Q9BQE5 337 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 C2orf49Q9BVC5 232 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 KCTD10Q9H3F6 313 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 TLE6Q9H808 572 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 RBM12Q9NTZ6 932 aaKnown RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 KCTD5Q9NXV2 234 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 CDH9Q9ULB4 789 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 ADGRA2Q96PE1 1338 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 CYP2F1P24903 491 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 AP2B1P63010 937 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 KYNUQ16719 465 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 DCLRE1AQ6PJP8 1040 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 EFL1Q7Z2Z2 1120 aaKnown RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 MAML3Q96JK9 1138 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 ATP6V1G3Q96LB4 118 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 PNKPQ96T60 521 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 DNAJC7Q99615 494 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 PRPF18Q99633 342 aaKnown RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 TSEN34Q9BSV6 310 aaKnown RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 FICDQ9BVA6 458 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 LRRC40Q9H9A6 602 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 NUDT5Q9UKK9 219 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 DRG1Q9Y295 367 aaKnown RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 C2CD2Q9Y426 696 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 BCL9LQ86UU0 1499 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 COL1A2P08123 1366 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 GNRH1P01148 92 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 NFICP08651 508 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 PTPN7P35236 360 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 HPCAP84074 193 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 CCZ1BP86790 482 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 CCZ1P86791 482 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 PRKCZQ05513 592 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 BNIP1Q12981 228 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 STX3Q13277 289 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 DDX39BQ13838 428 aaKnown RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 TEDDM1Q5T9Z0 273 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 EXD1Q8NHP7 514 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 HAS1Q92839 578 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 GFM2Q969S9 779 aaKnown RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 SMYD3Q9H7B4 428 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 COPS7BQ9H9Q2 264 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 TBC1D13Q9NVG8 400 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 NMRK1Q9NWW6 199 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 GRID1Q9ULK0 1009 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 RIPK3Q9Y572 518 aa7.09□□□□□ -1.27
SRGAP1-206ENST00000543397 SDR42E2A6NKP2 422 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 CHUKO15111 745 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 CCDC159P0C7I6 412 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 HSPA9P38646 679 aaKnown RBP7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms