RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 ENOSF1Q7L5Y1 443 aa13.7□□□□□ -0.22
TNFRSF1A-215ENST00000543359 FRMD1Q8N878 549 aa13.7□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ZNF606Q8WXB4 792 aa13.7□□□□□ -0.22
TNFRSF1A-215ENST00000543359 BHMTQ93088 406 aa13.7□□□□□ -0.22
TNFRSF1A-215ENST00000543359 GABRG3Q99928 467 aa13.7□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SLC4A5Q9BY07 1137 aa13.7□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SIX2Q9NPC8 291 aa13.7□□□□□ -0.22
TNFRSF1A-215ENST00000543359 RXFP3Q9NSD7 469 aa13.7□□□□□ -0.22
TNFRSF1A-215ENST00000543359 OLA1Q9NTK5 396 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MBD1Q9UIS9 605 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-215ENST00000543359 AJAP1Q9UKB5 411 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-215ENST00000543359 PCDHGA5Q9Y5G8 931 aa13.7□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MSI1O43347 362 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 P2RY2P41231 377 aa13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 FOXK2Q01167 660 aa13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SF3A2Q15428 464 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 CCDC6Q16204 474 aa13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MEA1Q16626 185 aa13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 PMS2CLQ68D20 193 aa13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 RNF43Q68DV7 783 aa13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 NUDT18Q6ZVK8 323 aa13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TRMT11Q7Z4G4 463 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SCUBE3Q8IX30 993 aa13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 STK32AQ8WU08 396 aa13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 THAP9Q9H5L6 903 aa13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 APEX2Q9UBZ4 518 aa13.69□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TCRBV21S2A2A0A5A6 115 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 BCLAF3A2AJT9 711 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 WASH3PC4AMC7 463 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ALDH1A2O94788 518 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 RHOBTB1O94844 696 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 FBXO21O94952 628 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 LATS1O95835 1130 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 LTFP02788 710 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 KRT5P13647 590 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 GABRG2P18507 467 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SDHBP21912 280 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ERCC5P28715 1186 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 WASP42768 502 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ENPP2Q13822 863 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 EXOC3L4Q17RC7 722 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 GEN1Q17RS7 908 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MIIPQ5JXC2 388 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TMEM215Q68D42 235 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SMYD5Q6GMV2 418 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 KIAA1211LQ6NV74 962 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 GBP6Q6ZN66 633 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 DGLUCYQ7Z3D6 616 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TMEM110Q86TL2 294 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 WDTC1Q8N5D0 677 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 RNF139Q8WU17 664 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 HMGB4Q8WW32 186 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 RLN3Q8WXF3 142 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SHC3Q92529 594 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 NUP62CLQ9H1M0 184 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SMOC1Q9H4F8 434 aa13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 POLMQ9NP87 494 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TPRP12270 2363 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TNRC6BQ9UPQ9 1833 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 EPG5Q9HCE0 2579 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MED19A0JLT2 244 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SLC30A4O14863 429 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 PAPSS1O43252 624 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 LETM1O95202 739 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 HOXB2P14652 356 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 HOXD9P28356 352 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MPLP40238 635 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 HARS2P49590 506 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SGSHP51688 502 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MAN2A1Q16706 1144 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 FAM133BQ5BKY9 247 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ADGRF1Q5T601 910 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 BEND5Q7L4P6 421 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 C11orf74Q86VG3 221 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 CREBRFQ8IUR6 639 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 GPT2Q8TD30 523 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 NETO1Q8TDF5 533 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 IPO4Q8TEX9 1081 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 AZIN2Q96A70 460 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SLC39A13Q96H72 371 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 FAM81BQ96LP2 452 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SLC2A11Q9BYW1 496 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MIS12Q9H081 205 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 CACNA2D2Q9NY47 1150 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 THAP10Q9P2Z0 257 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ACACBO00763 2458 aa13.67□□□□□ -0.22
TNFRSF1A-215ENST00000543359 PI4KAP42356 2102 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TM4SF5O14894 197 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 FOXD2O60548 495 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 GNA15P30679 374 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 CLCN1P35523 988 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ANP32AP39687 249 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MTIF2P46199 727 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 LIMK1P53667 647 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 RING1Q06587 406 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 KCNMA1Q12791 1236 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 EIF4EBP2Q13542 120 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ELF2Q15723 593 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms