RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 TREML1Q86YW5 311 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 C12orf29Q8N999 325 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 DTX3LQ8TDB6 740 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 SIGLEC10Q96LC7 697 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 PDZD7Q9H5P4 517 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 ZNF487B1APH4 448 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 F8W8V4 182 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 BIRC5O15392 142 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 KITP10721 976 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 TPSB2P20231 275 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 CCNHP51946 323 aaPredicted RBP17.15■□□□□ 0.34
KDM2B-216ENST00000543025 AQP5P55064 265 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 POU5F1BQ06416 359 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 GRIK3Q13003 919 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 TPSAB1Q15661 275 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 TBCCQ15814 346 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 DEFB115Q30KQ5 88 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 PPP6R3Q5H9R7 873 aaPredicted RBP17.15■□□□□ 0.34
KDM2B-216ENST00000543025 MROH9Q5TGP6 573 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 TRMT10BQ6PF06 316 aaKnown RBP17.15■□□□□ 0.34
KDM2B-216ENST00000543025 APLFQ8IW19 511 aaPredicted RBP17.15■□□□□ 0.34
KDM2B-216ENST00000543025 NRDE2Q9H7Z3 1164 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 MARCOQ9UEW3 520 aaPredicted RBP17.15■□□□□ 0.34
KDM2B-216ENST00000543025 TAGLN3Q9UI15 199 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 PCDHA11Q9Y5I1 949 aa17.15■□□□□ 0.34
KDM2B-216ENST00000543025 CSDE1O75534 798 aaKnown RBP17.14■□□□□ 0.33
KDM2B-216ENST00000543025 METTL18O95568 372 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 STAU1O95793 577 aaKnown RBP17.14■□□□□ 0.33
KDM2B-216ENST00000543025 BPGMP07738 259 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 RBP5P82980 135 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 SLC6A3Q01959 620 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 AP1B1Q10567 949 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 AMHR2Q16671 573 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 PMF1Q6P1K2 205 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 ARCQ7LC44 396 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 RBM15BQ8NDT2 890 aaKnown RBP17.14■□□□□ 0.33
KDM2B-216ENST00000543025 LRRN4Q8WUT4 740 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 CPB2Q96IY4 423 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 PARK7Q99497 189 aaKnown RBP17.14■□□□□ 0.33
KDM2B-216ENST00000543025 HBS1LQ9Y450 684 aaKnown RBP17.14■□□□□ 0.33
KDM2B-216ENST00000543025 CCDC189A1A4V9 331 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 HMX2A2RU54 273 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 SPECC1L-ADORA2AF8WAN1 911 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 GCATO75600 419 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 C22orf31O95567 290 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 PGK2P07205 417 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 CYP2F1P24903 491 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 RCN2Q14257 317 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 KYAT1Q16773 422 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 DNAL1Q4LDG9 190 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 PPP1R26Q5T8A7 1209 aaPredicted RBP17.14■□□□□ 0.33
KDM2B-216ENST00000543025 TMEM154Q6P9G4 183 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 IFNL1Q8IU54 200 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 MPP5Q8N3R9 675 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 STKLD1Q8NE28 680 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 DEPDC1BQ8WUY9 529 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 CAPNS2Q96L46 248 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 LBHD1Q9BQE6 289 aaPredicted RBP17.14■□□□□ 0.33
KDM2B-216ENST00000543025 TRIM56Q9BRZ2 755 aaKnown RBP17.14■□□□□ 0.33
KDM2B-216ENST00000543025 ZNF395Q9H8N7 513 aaPredicted RBP17.14■□□□□ 0.33
KDM2B-216ENST00000543025 DPP3Q9NY33 737 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 C2CD2Q9Y426 696 aa17.14■□□□□ 0.33
KDM2B-216ENST00000543025 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.14■□□□□ 0.33
KDM2B-216ENST00000543025 A0A087WZ62 844 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 CNTFP26441 200 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 HDAC4P56524 1084 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 INHBEP58166 350 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 IRX1P78414 480 aaPredicted RBP17.13■□□□□ 0.33
KDM2B-216ENST00000543025 SREBF2Q12772 1141 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 C6orf163Q5TEZ5 329 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 NET1Q7Z628 596 aaPredicted RBP17.13■□□□□ 0.33
KDM2B-216ENST00000543025 SCUBE1Q8IWY4 988 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 GTF3C2Q8WUA4 911 aaPredicted RBP17.13■□□□□ 0.33
KDM2B-216ENST00000543025 AFG1LQ8WV93 481 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 FDXACB1Q9BRP7 624 aaPredicted RBP17.13■□□□□ 0.33
KDM2B-216ENST00000543025 CCDC106Q9BWC9 280 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 YIPF3Q9GZM5 350 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 C20orf27Q9GZN8 174 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 XAB2Q9HCS7 855 aaKnown RBP17.13■□□□□ 0.33
KDM2B-216ENST00000543025 TM7SF2O76062 418 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 SERPINA6P08185 405 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 ZFXP17010 805 aaPredicted RBP17.13■□□□□ 0.33
KDM2B-216ENST00000543025 AMPD1P23109 780 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 PEX19P40855 299 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 IGBP1P78318 339 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 KDSRQ06136 332 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 WASHC5Q12768 1159 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 STX3Q13277 289 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 Q3C1V9 767 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 MDH1BQ5I0G3 518 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 TIFABQ6ZNK6 161 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 SESTD1Q86VW0 696 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 FBXO16Q8IX29 292 aaPredicted RBP17.13■□□□□ 0.33
KDM2B-216ENST00000543025 COPS5Q92905 334 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 KHSRPQ92945 711 aaKnown RBP eCLIP17.13■□□□□ 0.33
KDM2B-216ENST00000543025 FGD4Q96M96 766 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 RILPQ96NA2 401 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 SYT15Q9BQS2 421 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 SLC4A5Q9BY07 1137 aa17.13■□□□□ 0.33
KDM2B-216ENST00000543025 GCOM2Q9BZD3 368 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms