RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 LCLAT1Q6UWP7 414 aa10.99□□□□□ -0.65
CALU-206ENST00000542996 SYDE1Q6ZW31 735 aaPredicted RBP10.99□□□□□ -0.65
CALU-206ENST00000542996 ARMC2Q8NEN0 867 aa10.99□□□□□ -0.65
CALU-206ENST00000542996 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.99□□□□□ -0.65
CALU-206ENST00000542996 GRIN3AQ8TCU5 1115 aa10.99□□□□□ -0.65
CALU-206ENST00000542996 MYEOVQ96EZ4 313 aa10.99□□□□□ -0.65
CALU-206ENST00000542996 IFT74Q96LB3 600 aa10.99□□□□□ -0.65
CALU-206ENST00000542996 RUNDC3BQ96NL0 473 aa10.99□□□□□ -0.65
CALU-206ENST00000542996 TBCBQ99426 244 aa10.99□□□□□ -0.65
CALU-206ENST00000542996 PSMC3IPQ9P2W1 217 aaPredicted RBP10.99□□□□□ -0.65
CALU-206ENST00000542996 LNPEPQ9UIQ6 1025 aa10.99□□□□□ -0.65
CALU-206ENST00000542996 FAM159BA6NKW6 160 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 LSM8O95777 96 aaKnown RBP10.98□□□□□ -0.65
CALU-206ENST00000542996 ACAT1P24752 427 aaKnown RBP10.98□□□□□ -0.65
CALU-206ENST00000542996 CCNFP41002 786 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 CXCR3P49682 368 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 PTK7Q13308 1070 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 ZNF460Q14592 562 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 RAPH1Q70E73 1250 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 TFB1MQ8WVM0 346 aaKnown RBP10.98□□□□□ -0.65
CALU-206ENST00000542996 UNKQ9C0B0 810 aaKnown RBP10.98□□□□□ -0.65
CALU-206ENST00000542996 SLC24A3Q9HC58 644 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 WDR6Q9NNW5 1121 aaKnown RBP10.98□□□□□ -0.65
CALU-206ENST00000542996 PARP2Q9UGN5 583 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 TRIM49D1C9J1S8 452 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 GRM1Q13255 1194 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 ZNF792Q3KQV3 632 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 PPM1LQ5SGD2 360 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 DPY19L2Q6NUT2 758 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 NT5C3BQ969T7 300 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 HPDLQ96IR7 371 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 CSPG4P5Q96PW8 444 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 WDR27A2RRH5 827 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 MYADML2A6NDP7 307 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 KCNN4O15554 427 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 RNASEH1O60930 286 aaKnown RBP10.98□□□□□ -0.65
CALU-206ENST00000542996 GAS8O95995 478 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 APRTP07741 180 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 CALB2P22676 271 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 SERPINB4P48594 390 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 PIGHQ14442 188 aaPredicted RBP10.98□□□□□ -0.65
CALU-206ENST00000542996 PLA2G4EQ3MJ16 856 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 ZNF789Q5FWF6 425 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 PDE4DIPQ5VU43 2346 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 MTHFD1LQ6UB35 978 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 SPATA6LQ8N4H0 392 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 TMEM209Q96SK2 561 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 MRPL4Q9BYD3 311 aaKnown RBP10.98□□□□□ -0.65
CALU-206ENST00000542996 MANSC1Q9H8J5 431 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 SETD4Q9NVD3 440 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 SAMD15Q9P1V8 674 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 SCN4AP35499 1836 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 PDGFRAP16234 1089 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 KRT15P19012 456 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 RPL10P27635 214 aaKnown RBP10.98□□□□□ -0.65
CALU-206ENST00000542996 PLCB3Q01970 1234 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 STRN3Q13033 797 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 DCUN1D2Q6PH85 259 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 TTC17Q96AE7 1141 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 CFAP36Q96G28 342 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 MLPHQ9BV36 600 aaPredicted RBP10.98□□□□□ -0.65
CALU-206ENST00000542996 HOMER3Q9NSC5 361 aa10.98□□□□□ -0.65
CALU-206ENST00000542996 ZCWPW2A0A1B0GU75 182 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 TTC24A2A3L6 582 aaPredicted RBP10.97□□□□□ -0.65
CALU-206ENST00000542996 SDR42E2A6NKP2 422 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 G3V2L1 256 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 C6orf222P0C671 652 aaPredicted RBP10.97□□□□□ -0.65
CALU-206ENST00000542996 ZBTB17Q13105 803 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 USP4Q13107 963 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 PARP6Q2NL67 630 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 NOMO2Q5JPE7 1267 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 KCNT2Q6UVM3 1135 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 TMEM35BQ8NCS4 154 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 SMG8Q8ND04 991 aaKnown RBP10.97□□□□□ -0.65
CALU-206ENST00000542996 PYROXD1Q8WU10 500 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 LRRC37BQ96QE4 947 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 TCHPQ9BT92 498 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 NRDE2Q9H7Z3 1164 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 MRPL47Q9HD33 250 aaKnown RBP10.97□□□□□ -0.65
CALU-206ENST00000542996 SUN1O94901 812 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 ITGB1P05556 798 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 SLC25A3Q00325 362 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 BLMHQ13867 455 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 CNTD1Q8N815 330 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 STK32AQ8WU08 396 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 GATA6Q92908 595 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 PGBD4Q96DM1 585 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 SUDS3Q9H7L9 328 aaPredicted RBP10.97□□□□□ -0.65
CALU-206ENST00000542996 EHMT1Q9H9B1 1298 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 CCDC78A2IDD5 438 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 FCHO1O14526 889 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 IGHA2P01877 340 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 ERVK-10P10266 1014 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 TBXAS1P24557 533 aaPredicted RBP10.97□□□□□ -0.65
CALU-206ENST00000542996 MLH1P40692 756 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 KCNC1P48547 511 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 GRIK3Q13003 919 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 EIF4EBP2Q13542 120 aaPredicted RBP10.97□□□□□ -0.65
CALU-206ENST00000542996 CCNIQ14094 377 aa10.97□□□□□ -0.65
CALU-206ENST00000542996 THEMIS2Q5TEJ8 643 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms