RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 IFNA16P05015 189 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ATP5BP06576 529 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 SNRPAP09012 282 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 IFIT2P09913 472 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 KRT3P12035 628 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 RARGP13631 454 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 UQCRBP14927 111 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 RRM2P31350 389 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 HPDP32754 393 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 STX2P32856 288 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 CTNNA1P35221 906 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 PBX1P40424 430 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 IARSP41252 1262 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 MTHFRP42898 656 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ABCG1P45844 678 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 TRAPPC10P48553 1259 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 SLC9A3P48764 834 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 C21orf59P57076 290 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 CD83Q01151 205 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 BNC1Q01954 994 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 GFPT1Q06210 699 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF33BQ06732 778 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 CDC20Q12834 499 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 SLBPQ14493 270 aaKnown RBP eCLIP4.49□□□□□ -1.692e-8■□□□□ 9.6
SNHG1-219ENST00000542112 KRT32Q14532 448 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 KRT81Q14533 505 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 VPS72Q15906 364 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ZYXQ15942 572 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 GRIK4Q16099 956 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 LRRC36Q1X8D7 754 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 WDR72Q3MJ13 1102 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 VWA5B1Q5TIE3 1220 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 AGAP7PQ5VUJ5 663 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 SLFN13Q68D06 897 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 GTF2IRD2BQ6EKJ0 949 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 OR7E24Q6IFN5 339 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 SHISA2Q6UWI4 295 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 C4orf50Q6ZRC1 276 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ARHGAP27Q6ZUM4 889 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 USP43Q70EL4 1123 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 IKBIPQ70UQ0 350 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 EEPD1Q7L9B9 569 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 GSTA5Q7RTV2 222 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 GTF2IRD2Q86UP8 949 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 NLRP10Q86W26 655 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 CREG2Q8IUH2 290 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 SIRT2Q8IXJ6 389 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 MB21D2Q8IYB1 491 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 DIS3L2Q8IYB7 885 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ELMOD2Q8IZ81 293 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 VPS52Q8N1B4 723 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 NLGN1Q8N2Q7 840 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 LIX1Q8N485 282 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 MARVELD2Q8N4S9 558 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 MFSD2AQ8NA29 543 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 CATSPER1Q8NEC5 780 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 FLAD1Q8NFF5 587 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 TTLQ8NG68 377 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 OR52K2Q8NGK3 314 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF420Q8TAQ5 688 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ADAMTS16Q8TE57 1224 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 CYB5D2Q8WUJ1 264 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 SLC9A6Q92581 669 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 LRRC59Q96AG4 307 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 VPS33AQ96AX1 596 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 NMD3Q96D46 503 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 HSPBAP1Q96EW2 488 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 EDC3Q96F86 508 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 RMND5BQ96G75 393 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF578Q96N58 590 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 KRT12Q99456 494 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 C17orf80Q9BSJ5 609 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 CALN1Q9BXU9 219 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ROPN1BQ9BZX4 212 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 FOXQ1Q9C009 403 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 CCSER1Q9C0I3 900 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 TMEM60Q9H2L4 133 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 RMND5AQ9H871 391 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 FBRSQ9HAH7 460 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ROPN1Q9HAT0 212 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 KCNK13Q9HB14 408 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 MAGEE1Q9HCI5 957 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 SDHAF3Q9NRP4 125 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 FAM105AQ9NUU6 356 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 MRGBPQ9NV56 204 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 INTS9Q9NV88 658 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 SYBUQ9NX95 663 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 SIRT5Q9NXA8 310 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 HMG20BQ9P0W2 317 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 EXTL2Q9UBQ6 330 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 NKX1-2Q9UD57 310 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF214Q9UL59 606 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 PALD1Q9ULE6 856 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 VPS4AQ9UN37 437 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 TNNQ9UQP3 1299 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF175Q9Y473 711 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 PRKAB1Q9Y478 270 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 EID1Q9Y6B2 187 aa4.49□□□□□ -1.69
SNHG1-219ENST00000542112 MAD1L1Q9Y6D9 718 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms