RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 ERVPABLB-1P60509 514 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 ILKQ13418 452 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 ZNF234Q14588 700 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 KYAT1Q16773 422 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 ARL13BQ3SXY8 428 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 HAUS3Q68CZ6 603 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 CLEC18BQ6UXF7 455 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 C4orf50Q6ZRC1 276 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 CACTIN-AS1Q8N1I8 211 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 CLEC18CQ8NCF0 446 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 SNX29Q8TEQ0 813 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 ZNF274Q96GC6 653 aaPredicted RBP10.31□□□□□ -0.76
CHFR-220ENST00000541817 ZNF560Q96MR9 790 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 ZNF396Q96N95 335 aaPredicted RBP10.31□□□□□ -0.76
CHFR-220ENST00000541817 TSPAN18Q96SJ8 248 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 AASDHPPTQ9NRN7 309 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 THSD1Q9NS62 852 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 DNM3Q9UQ16 869 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 ZFC3H1O60293 1989 aaKnown RBP10.31□□□□□ -0.76
CHFR-220ENST00000541817 ARID1BQ8NFD5 2236 aaPredicted RBP10.31□□□□□ -0.76
CHFR-220ENST00000541817 CKAP5Q14008 2032 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 CLDN5O00501 218 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 TRIM38O00635 465 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 DXOO77932 396 aaKnown RBP10.3□□□□□ -0.76
CHFR-220ENST00000541817 CTDNEP1O95476 244 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 TBX18O95935 607 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 ACO1P21399 889 aaKnown RBP10.3□□□□□ -0.76
CHFR-220ENST00000541817 PPP3CCP48454 512 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 PGFP49763 221 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 RACK1P63244 317 aaKnown RBP10.3□□□□□ -0.76
CHFR-220ENST00000541817 TFAMQ00059 246 aaKnown RBP10.3□□□□□ -0.76
CHFR-220ENST00000541817 CLN3Q13286 438 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 ZRSR1Q15695 479 aaKnown RBP10.3□□□□□ -0.76
CHFR-220ENST00000541817 MDH1BQ5I0G3 518 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 HECTD3Q5T447 861 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 ATL3Q6DD88 541 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 HS2ST1Q7LGA3 356 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 TMC6Q7Z403 805 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 DIS3L2Q8IYB7 885 aaKnown RBP10.3□□□□□ -0.76
CHFR-220ENST00000541817 LSMEM2Q8N112 164 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 TMEM86AQ8N2M4 240 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 FBXO32Q969P5 355 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 LIN37Q96GY3 246 aaPredicted RBP10.3□□□□□ -0.76
CHFR-220ENST00000541817 SLITRK1Q96PX8 696 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 PLIN2Q99541 437 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 BTBD1Q9H0C5 482 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 NUP62CLQ9H1M0 184 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 PCED1AQ9H1Q7 454 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 EPN3Q9H201 632 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 C17orf75Q9HAS0 396 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 BRMS1Q9HCU9 246 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 WDR35Q9P2L0 1181 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 NOL7Q9UMY1 257 aaKnown RBP10.3□□□□□ -0.76
CHFR-220ENST00000541817 C2CD2Q9Y426 696 aa10.3□□□□□ -0.76
CHFR-220ENST00000541817 FBN2P35556 2912 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 GABRDO14764 452 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 SIGLEC6O43699 453 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 OPA1O60313 960 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 GREM1O60565 184 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 JAK2O60674 1132 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 KRT19P08727 400 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 FDPSP14324 419 aaKnown RBP10.29□□□□□ -0.76
CHFR-220ENST00000541817 MUTP22033 750 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 ACP1P24666 158 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 PCSK1P29120 753 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 BCAT1P54687 386 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 RIPPLY3P57055 190 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 NOP14P78316 857 aaKnown RBP10.29□□□□□ -0.76
CHFR-220ENST00000541817 DAB2P98082 770 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 E2F1Q01094 437 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 GUCY1B3Q02153 619 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 MAPK8IP2Q13387 824 aaPredicted RBP10.29□□□□□ -0.76
CHFR-220ENST00000541817 ENPP2Q13822 863 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 SOWAHAQ2M3V2 549 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 PROX2Q3B8N5 592 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 SGO2Q562F6 1265 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 CDCP2Q5VXM1 449 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 KIAA0895LQ68EN5 471 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 VSTM1Q6UX27 236 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 USP53Q70EK8 1073 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 KANSL1Q7Z3B3 1105 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 FAM26EQ8N5C1 309 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 CSGALNACT2Q8N6G5 542 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 ZSWIM2Q8NEG5 633 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 SCAMP5Q8TAC9 235 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 PCED1BQ96HM7 432 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 DEPDC7Q96QD5 511 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 NACA2Q9H009 215 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 ASB7Q9H672 318 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 GDF3Q9NR23 364 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 TFIP11Q9UBB9 837 aaKnown RBP10.29□□□□□ -0.76
CHFR-220ENST00000541817 PLEKHB1Q9UF11 243 aaPredicted RBP10.29□□□□□ -0.76
CHFR-220ENST00000541817 CLEC4EQ9ULY5 219 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 NME7Q9Y5B8 376 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 ABCA12Q86UK0 2595 aa10.29□□□□□ -0.76
CHFR-220ENST00000541817 A0A1W2PR77 199 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 TPM3P06753 285 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 YWHAQP27348 245 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 CD38P28907 300 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 RBMS1P29558 406 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms