RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 LRRC6Q86X45 466 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 CRYBG2Q8N1P7 616 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 SLC4A5Q9BY07 1137 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 DDX56Q9NY93 547 aaKnown RBP17.79■□□□□ 0.44
SPIDR-227ENST00000541342 GRAP2O75791 330 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 RASSF2P50749 326 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 SH2D5Q6ZV89 423 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 UNC45BQ8IWX7 931 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 PHACTR1Q9C0D0 580 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 PADI3Q9ULW8 664 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 LUC7L3O95232 432 aaKnown RBP17.78■□□□□ 0.44
SPIDR-227ENST00000541342 ETV4P43268 484 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 TAZQ16635 292 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 OLFML1Q6UWY5 402 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 AGMOQ6ZNB7 445 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 ADGRF2Q8IZF7 708 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 OSBPL1AQ9BXW6 950 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 FBXO6Q9NRD1 293 aaPredicted RBP17.78■□□□□ 0.44
SPIDR-227ENST00000541342 C2CD4BA6NLJ0 364 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 TM9SF1O15321 606 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 CST8O60676 142 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 DHRS4L1P0CG22 281 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 ATP6V1C1P21283 382 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 ARL4CP56559 192 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 ITGA7Q13683 1181 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 FYB2Q5VWT5 728 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 TMEM110Q86TL2 294 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 KHSRPQ92945 711 aaKnown RBP eCLIP17.78■□□□□ 0.447e-14■■■■□ 21.1
SPIDR-227ENST00000541342 SERAC1Q96JX3 654 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 VPS11Q9H270 941 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 MANSC1Q9H8J5 431 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 A0A0G2JND7 137 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 GPR182O15218 404 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 ADORA2BP29275 332 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 TUBP50607 506 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 ZNF143P52747 638 aaPredicted RBP17.78■□□□□ 0.44
SPIDR-227ENST00000541342 CMPK2Q5EBM0 449 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 SCUBE3Q8IX30 993 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 PCSK9Q8NBP7 692 aaKnown RBP17.78■□□□□ 0.44
SPIDR-227ENST00000541342 SH3TC2Q8TF17 1288 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 SKA1Q96BD8 255 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 CFHR5Q9BXR6 569 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 B3GNT5Q9BYG0 378 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 SNX25Q9H3E2 840 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 PCSK1NQ9UHG2 260 aa17.78■□□□□ 0.44
SPIDR-227ENST00000541342 ARL5CA6NH57 179 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 HUS1O60921 280 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 MIPP30301 263 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 BBS12Q6ZW61 710 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 PCGF5Q86SE9 256 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 RXFP2Q8WXD0 754 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 TSPYL2Q9H2G4 693 aaPredicted RBP17.77■□□□□ 0.44
SPIDR-227ENST00000541342 HEY2Q9UBP5 337 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 HESX1Q9UBX0 185 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 C2orf71A6NGG8 1288 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 PAPSS1O43252 624 aaPredicted RBP17.77■□□□□ 0.44
SPIDR-227ENST00000541342 LPIN1Q14693 890 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 TRIM71Q2Q1W2 868 aaKnown RBP17.77■□□□□ 0.44
SPIDR-227ENST00000541342 C15orf59Q2T9L4 293 aaPredicted RBP17.77■□□□□ 0.44
SPIDR-227ENST00000541342 TOP6BLQ8N6T0 577 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 PEBP4Q96S96 227 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 CREBZFQ9NS37 354 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 ZFATQ9P243 1243 aa17.77■□□□□ 0.44
SPIDR-227ENST00000541342 RPL26L1Q9UNX3 145 aaKnown RBP17.77■□□□□ 0.44
SPIDR-227ENST00000541342 DLDP09622 509 aaKnown RBP17.77■□□□□ 0.43
SPIDR-227ENST00000541342 SETSIPP0DME0 302 aa17.77■□□□□ 0.43
SPIDR-227ENST00000541342 GPD1P21695 349 aa17.77■□□□□ 0.43
SPIDR-227ENST00000541342 TKTP29401 623 aaKnown RBP17.77■□□□□ 0.43
SPIDR-227ENST00000541342 PHBP35232 272 aa17.77■□□□□ 0.43
SPIDR-227ENST00000541342 NEK3P51956 506 aa17.77■□□□□ 0.43
SPIDR-227ENST00000541342 ACLYP53396 1101 aa17.77■□□□□ 0.43
SPIDR-227ENST00000541342 NAIF1Q69YI7 327 aaPredicted RBP17.77■□□□□ 0.43
SPIDR-227ENST00000541342 CYP4V2Q6ZWL3 525 aaPredicted RBP17.77■□□□□ 0.43
SPIDR-227ENST00000541342 NRG4Q8WWG1 115 aa17.77■□□□□ 0.43
SPIDR-227ENST00000541342 CFAP69A5D8W1 941 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 WARSP23381 471 aaKnown RBP17.76■□□□□ 0.43
SPIDR-227ENST00000541342 CLCNKBP51801 687 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 KLHL38Q2WGJ6 581 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 REM2Q8IYK8 340 aaPredicted RBP17.76■□□□□ 0.43
SPIDR-227ENST00000541342 ANKRD52Q8NB46 1076 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 C3orf58Q8NDZ4 430 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 SLC2A14Q8TDB8 520 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 CLEC4CQ8WTT0 213 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 DPPA5A6NC42 116 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 CYB561D2O14569 222 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 TRUB2O95900 331 aaKnown RBP17.76■□□□□ 0.43
SPIDR-227ENST00000541342 KRT7P08729 469 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 TROVE2P10155 538 aaKnown RBP eCLIP17.76■□□□□ 0.43
SPIDR-227ENST00000541342 PDGFRAP16234 1089 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 KDELR1P24390 212 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 SERPINB3P29508 390 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 SCNN1GP51170 649 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 PRKD1Q15139 912 aaPredicted RBP17.76■□□□□ 0.43
SPIDR-227ENST00000541342 BBS9Q3SYG4 887 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 WSCD1Q658N2 575 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 MRPL10Q7Z7H8 261 aaKnown RBP17.76■□□□□ 0.43
SPIDR-227ENST00000541342 TTC7BQ86TV6 843 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 BTBD10Q9BSF8 475 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 DCLRE1BQ9H816 532 aa17.76■□□□□ 0.43
SPIDR-227ENST00000541342 XPO7Q9UIA9 1087 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms