RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 USP3Q9Y6I4 520 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 APC2O95996 2303 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 MDM4O15151 490 aa28.15■■■□□ 2.1
CHFR-218ENST00000540963 CILPO75339 1184 aa28.15■■■□□ 2.1
CHFR-218ENST00000540963 KLKB1P03952 638 aa28.15■■■□□ 2.1
CHFR-218ENST00000540963 DLG4P78352 724 aa28.15■■■□□ 2.1
CHFR-218ENST00000540963 C19orf48Q6RUI8 117 aa28.15■■■□□ 2.1
CHFR-218ENST00000540963 ANKS1BQ7Z6G8 1248 aa28.15■■■□□ 2.1
CHFR-218ENST00000540963 SCD5Q86SK9 330 aa28.15■■■□□ 2.1
CHFR-218ENST00000540963 C1orf216Q8TAB5 229 aa28.15■■■□□ 2.1
CHFR-218ENST00000540963 P2RY11Q96G91 374 aa28.15■■■□□ 2.1
CHFR-218ENST00000540963 PIWIL1Q96J94 861 aaKnown RBP28.15■■■□□ 2.1
CHFR-218ENST00000540963 SLC2A11Q9BYW1 496 aa28.15■■■□□ 2.1
CHFR-218ENST00000540963 ELOVL2Q9NXB9 296 aa28.15■■■□□ 2.1
CHFR-218ENST00000540963 NUDT5Q9UKK9 219 aa28.15■■■□□ 2.1
CHFR-218ENST00000540963 TIMM44O43615 452 aa28.14■■■□□ 2.1
CHFR-218ENST00000540963 C7P10643 843 aa28.14■■■□□ 2.1
CHFR-218ENST00000540963 ACADMP11310 421 aa28.14■■■□□ 2.1
CHFR-218ENST00000540963 CASP1P29466 404 aa28.14■■■□□ 2.1
CHFR-218ENST00000540963 COL28A1Q2UY09 1125 aa28.14■■■□□ 2.1
CHFR-218ENST00000540963 SOWAHCQ53LP3 525 aaPredicted RBP28.14■■■□□ 2.1
CHFR-218ENST00000540963 CPXM2Q8N436 756 aa28.14■■■□□ 2.1
CHFR-218ENST00000540963 SPRYD3Q8NCJ5 442 aa28.14■■■□□ 2.1
CHFR-218ENST00000540963 CABIN1Q9Y6J0 2220 aa28.14■■■□□ 2.09
CHFR-218ENST00000540963 IGSF10Q6WRI0 2623 aa28.13■■■□□ 2.09
CHFR-218ENST00000540963 PDXKO00764 312 aa28.13■■■□□ 2.09
CHFR-218ENST00000540963 CYBBP04839 570 aa28.13■■■□□ 2.09
CHFR-218ENST00000540963 COPAP53621 1224 aa28.13■■■□□ 2.09
CHFR-218ENST00000540963 CUL4BQ13620 913 aa28.13■■■□□ 2.09
CHFR-218ENST00000540963 ZNF234Q14588 700 aa28.13■■■□□ 2.09
CHFR-218ENST00000540963 HLA-BQ31612 363 aa28.13■■■□□ 2.09
CHFR-218ENST00000540963 RBBP8NLQ8NC74 664 aaPredicted RBP28.13■■■□□ 2.09
CHFR-218ENST00000540963 JAKMIP2Q96AA8 810 aa28.13■■■□□ 2.09
CHFR-218ENST00000540963 TWNKQ96RR1 684 aa28.13■■■□□ 2.09
CHFR-218ENST00000540963 DUSP16Q9BY84 665 aa28.13■■■□□ 2.09
CHFR-218ENST00000540963 IMPG2Q9BZV3 1241 aa28.13■■■□□ 2.09
CHFR-218ENST00000540963 IL21RQ9HBE5 538 aa28.13■■■□□ 2.09
CHFR-218ENST00000540963 FNDC3AQ9Y2H6 1198 aaKnown RBP28.13■■■□□ 2.09
CHFR-218ENST00000540963 K7ELQ4 463 aaPredicted RBP28.12■■■□□ 2.09
CHFR-218ENST00000540963 PIK3CAP42336 1068 aa28.12■■■□□ 2.09
CHFR-218ENST00000540963 BNC1Q01954 994 aa28.12■■■□□ 2.09
CHFR-218ENST00000540963 SUZ12Q15022 739 aaKnown RBP28.12■■■□□ 2.09
CHFR-218ENST00000540963 SPOPLQ6IQ16 392 aa28.12■■■□□ 2.09
CHFR-218ENST00000540963 GALNT15Q8N3T1 639 aa28.12■■■□□ 2.09
CHFR-218ENST00000540963 KCTD10Q9H3F6 313 aa28.12■■■□□ 2.09
CHFR-218ENST00000540963 OSGEPQ9NPF4 335 aa28.12■■■□□ 2.09
CHFR-218ENST00000540963 TOR4AQ9NXH8 423 aa28.12■■■□□ 2.09
CHFR-218ENST00000540963 FAM13BQ9NYF5 915 aa28.12■■■□□ 2.09
CHFR-218ENST00000540963 EIF2B4Q9UI10 523 aaKnown RBP28.12■■■□□ 2.09
CHFR-218ENST00000540963 KNL1Q8NG31 2342 aa28.11■■■□□ 2.09
CHFR-218ENST00000540963 MAPK13O15264 365 aa28.11■■■□□ 2.09
CHFR-218ENST00000540963 HLA-DRAP01903 254 aa28.11■■■□□ 2.09
CHFR-218ENST00000540963 CORO1AP31146 461 aaKnown RBP28.11■■■□□ 2.09
CHFR-218ENST00000540963 AFF3P51826 1226 aaKnown RBP28.11■■■□□ 2.09
CHFR-218ENST00000540963 ARHGAP18Q8N392 663 aa28.11■■■□□ 2.09
CHFR-218ENST00000540963 MDM1Q8TC05 714 aa28.11■■■□□ 2.09
CHFR-218ENST00000540963 AGO1Q9UL18 857 aaKnown RBP28.11■■■□□ 2.09
CHFR-218ENST00000540963 URB1O60287 2271 aaKnown RBP28.1■■■□□ 2.09
CHFR-218ENST00000540963 NR3C1P04150 777 aa28.1■■■□□ 2.09
CHFR-218ENST00000540963 AFMP43652 599 aa28.1■■■□□ 2.09
CHFR-218ENST00000540963 STK4Q13043 487 aa28.1■■■□□ 2.09
CHFR-218ENST00000540963 FAM217AQ8IXS0 508 aa28.1■■■□□ 2.09
CHFR-218ENST00000540963 KIAA0895Q8NCT3 520 aa28.1■■■□□ 2.09
CHFR-218ENST00000540963 RHBDD1Q8TEB9 315 aa28.1■■■□□ 2.09
CHFR-218ENST00000540963 UBXN6Q9BZV1 441 aa28.1■■■□□ 2.09
CHFR-218ENST00000540963 RASAL2Q9UJF2 1139 aa28.1■■■□□ 2.09
CHFR-218ENST00000540963 FRMD4BQ9Y2L6 1034 aa28.1■■■□□ 2.09
CHFR-218ENST00000540963 KLRC4O43908 158 aa28.09■■■□□ 2.09
CHFR-218ENST00000540963 ENPEPQ07075 957 aa28.09■■■□□ 2.09
CHFR-218ENST00000540963 PDE4CQ08493 712 aa28.09■■■□□ 2.09
CHFR-218ENST00000540963 SERPINA13PQ6UXR4 307 aa28.09■■■□□ 2.09
CHFR-218ENST00000540963 OR2T3Q8NH03 318 aa28.09■■■□□ 2.09
CHFR-218ENST00000540963 STRIP2Q9ULQ0 834 aa28.09■■■□□ 2.09
CHFR-218ENST00000540963 RAXQ9Y2V3 346 aa28.09■■■□□ 2.09
CHFR-218ENST00000540963 EPHX1P07099 455 aa28.08■■■□□ 2.09
CHFR-218ENST00000540963 PRKCHP24723 683 aa28.08■■■□□ 2.09
CHFR-218ENST00000540963 EFEMP1Q12805 493 aa28.08■■■□□ 2.09
CHFR-218ENST00000540963 CAMK2GQ13555 558 aaPredicted RBP28.08■■■□□ 2.09
CHFR-218ENST00000540963 TEAD4Q15561 434 aa28.08■■■□□ 2.09
CHFR-218ENST00000540963 C1orf220Q5T0J3 134 aa28.08■■■□□ 2.09
CHFR-218ENST00000540963 CEP57L1Q8IYX8 460 aa28.08■■■□□ 2.09
CHFR-218ENST00000540963 FAXDC2Q96IV6 333 aa28.08■■■□□ 2.09
CHFR-218ENST00000540963 CIPCQ9C0C6 399 aa28.08■■■□□ 2.09
CHFR-218ENST00000540963 NIF3L1Q9GZT8 377 aa28.08■■■□□ 2.09
CHFR-218ENST00000540963 FBRSQ9HAH7 460 aa28.08■■■□□ 2.09
CHFR-218ENST00000540963 EXOC1Q9NV70 894 aa28.08■■■□□ 2.09
CHFR-218ENST00000540963 GOLGA4Q13439 2230 aaKnown RBP28.08■■■□□ 2.09
CHFR-218ENST00000540963 CELSR3Q9NYQ7 3312 aa28.07■■■□□ 2.08
CHFR-218ENST00000540963 TMEM131Q92545 1883 aa28.07■■■□□ 2.08
CHFR-218ENST00000540963 ATXN1LP0C7T5 689 aaKnown RBP28.07■■■□□ 2.08
CHFR-218ENST00000540963 VAMP7P51809 220 aa28.07■■■□□ 2.08
CHFR-218ENST00000540963 ZNF445P59923 1031 aa28.07■■■□□ 2.08
CHFR-218ENST00000540963 ARID5AQ03989 594 aa28.07■■■□□ 2.08
CHFR-218ENST00000540963 PPP1R26Q5T8A7 1209 aaPredicted RBP28.07■■■□□ 2.08
CHFR-218ENST00000540963 RESP18Q5W5W9 173 aa28.07■■■□□ 2.08
CHFR-218ENST00000540963 DENND1CQ8IV53 801 aa28.07■■■□□ 2.08
CHFR-218ENST00000540963 TTC39CQ8N584 583 aa28.07■■■□□ 2.08
CHFR-218ENST00000540963 SNX21Q969T3 373 aa28.07■■■□□ 2.08
CHFR-218ENST00000540963 PLD4Q96BZ4 506 aa28.07■■■□□ 2.08
CHFR-218ENST00000540963 MARCH2Q9P0N8 246 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms