RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 CAMK2BQ13554 666 aa8.78□□□□□ -1
CHD4-208ENST00000540960 EEF1DP3Q658K8 133 aa8.78□□□□□ -1
CHD4-208ENST00000540960 PMS2CLQ68D20 193 aa8.78□□□□□ -1
CHD4-208ENST00000540960 AGMOQ6ZNB7 445 aa8.78□□□□□ -1
CHD4-208ENST00000540960 CYP2U1Q7Z449 544 aa8.78□□□□□ -1
CHD4-208ENST00000540960 SLC47A2Q86VL8 602 aa8.78□□□□□ -1
CHD4-208ENST00000540960 UNC93AQ86WB7 457 aa8.78□□□□□ -1
CHD4-208ENST00000540960 CREG2Q8IUH2 290 aa8.78□□□□□ -1
CHD4-208ENST00000540960 IFT20Q8IY31 132 aa8.78□□□□□ -1
CHD4-208ENST00000540960 SPATA4Q8NEY3 305 aa8.78□□□□□ -1
CHD4-208ENST00000540960 OR5B17Q8NGF7 314 aa8.78□□□□□ -1
CHD4-208ENST00000540960 RSPH1Q8WYR4 309 aa8.78□□□□□ -1
CHD4-208ENST00000540960 ZNF653Q96CK0 615 aa8.78□□□□□ -1
CHD4-208ENST00000540960 HPDLQ96IR7 371 aa8.78□□□□□ -1
CHD4-208ENST00000540960 CLSTN3Q9BQT9 956 aa8.78□□□□□ -1
CHD4-208ENST00000540960 TMEM175Q9BSA9 504 aa8.78□□□□□ -1
CHD4-208ENST00000540960 TLR10Q9BXR5 811 aa8.78□□□□□ -1
CHD4-208ENST00000540960 HAPLN2Q9GZV7 340 aa8.78□□□□□ -1
CHD4-208ENST00000540960 POLMQ9NP87 494 aaPredicted RBP8.78□□□□□ -1
CHD4-208ENST00000540960 CISHQ9NSE2 258 aa8.78□□□□□ -1
CHD4-208ENST00000540960 DPP3Q9NY33 737 aa8.78□□□□□ -1
CHD4-208ENST00000540960 FNIP2Q9P278 1114 aa8.78□□□□□ -1
CHD4-208ENST00000540960 IP6K2Q9UHH9 426 aa8.78□□□□□ -1
CHD4-208ENST00000540960 AJAP1Q9UKB5 411 aaPredicted RBP8.78□□□□□ -1
CHD4-208ENST00000540960 RAB21Q9UL25 225 aa8.78□□□□□ -1
CHD4-208ENST00000540960 SLC8A2Q9UPR5 921 aa8.78□□□□□ -1
CHD4-208ENST00000540960 AHCTF1Q8WYP5 2266 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 FAM149AA5PLN7 773 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 SPECC1L-ADORA2AF8WAN1 911 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 KCNK3O14649 394 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 NDC80O14777 642 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 B4GALT5O43286 388 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 SPOPO43791 374 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 SH3BP5O60239 455 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 XYLBO75191 536 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 RHOP08100 348 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 MMEP08473 750 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 SETSIPP0DME0 302 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 CXCL8P10145 99 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 VDRP11473 427 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 UNGP13051 313 aaPredicted RBP8.77□□□□□ -1.01
CHD4-208ENST00000540960 H2AFXP16104 143 aaPredicted RBP8.77□□□□□ -1.01
CHD4-208ENST00000540960 CHRNB2P17787 502 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 POU3F2P20265 443 aaPredicted RBP8.77□□□□□ -1.01
CHD4-208ENST00000540960 ABCB4P21439 1286 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 CTNNA2P26232 953 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 CTHP32929 405 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 TNFSF9P41273 254 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 OR1G1P47890 313 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 DHPSP49366 369 aaPredicted RBP8.77□□□□□ -1.01
CHD4-208ENST00000540960 KPNA1P52294 538 aaPredicted RBP8.77□□□□□ -1.01
CHD4-208ENST00000540960 RIPPLY3P57055 190 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 SLC8A3P57103 927 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 MYL6P60660 151 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 LMAN2Q12907 356 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 PTP4A2Q12974 167 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 SLC10A6Q3KNW5 377 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 WDR72Q3MJ13 1102 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 C4orf17Q53FE4 359 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 SEL1L2Q5TEA6 688 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 DPH6Q7L8W6 267 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 GPR155Q7Z3F1 870 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 NT5DC3Q86UY8 548 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 GPIHBP1Q8IV16 184 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 EFCAB13Q8IY85 973 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 COLGALT2Q8IYK4 626 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 MCOLN2Q8IZK6 566 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 GOLGA6L1Q8N7Z2 621 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 ZSWIM2Q8NEG5 633 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 SLC7A14Q8TBB6 771 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 ZNF564Q8TBZ8 553 aaPredicted RBP8.77□□□□□ -1.01
CHD4-208ENST00000540960 IPO4Q8TEX9 1081 aaKnown RBP8.77□□□□□ -1.01
CHD4-208ENST00000540960 SLC20A1Q8WUM9 679 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 ZNF606Q8WXB4 792 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 PGBD4Q96DM1 585 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 RSPRY1Q96DX4 576 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 HES6Q96HZ4 224 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 ASB16Q96NS5 453 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 FAM193BQ96PV7 902 aaPredicted RBP8.77□□□□□ -1.01
CHD4-208ENST00000540960 PI4K2AQ9BTU6 479 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 NUP85Q9BW27 656 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 FAM129AQ9BZQ8 928 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 THAP2Q9H0W7 228 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 SLITRK6Q9H5Y7 841 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 MINDY3Q9H8M7 445 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 ABCB6Q9NP58 842 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 FAM105AQ9NUU6 356 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 TMEM51Q9NW97 253 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 ADAM22Q9P0K1 906 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 CNTN3Q9P232 1028 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 CNOT8Q9UFF9 292 aaKnown RBP8.77□□□□□ -1.01
CHD4-208ENST00000540960 EVLQ9UI08 416 aaPredicted RBP8.77□□□□□ -1.01
CHD4-208ENST00000540960 NUB1Q9Y5A7 615 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 PTPRDP23468 1912 aa8.77□□□□□ -1.01
CHD4-208ENST00000540960 TDRD15B5MCY1 1934 aaKnown RBP8.76□□□□□ -1.01
CHD4-208ENST00000540960 PCDH15Q96QU1 1955 aa8.76□□□□□ -1.01
CHD4-208ENST00000540960 A0A0U1RQJ8 604 aa8.76□□□□□ -1.01
CHD4-208ENST00000540960 TEX51A0A1B0GUA7 166 aa8.76□□□□□ -1.01
CHD4-208ENST00000540960 MYBPHLA2RUH7 354 aa8.76□□□□□ -1.01
CHD4-208ENST00000540960 TLX3O43711 291 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms