RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ARNTLO00327 626 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 NFATC1O95644 943 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 IGLV3-25P01717 112 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 IGLV3-27P01718 113 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 SLC2A3P11169 496 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 ABCB4P21439 1286 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 SDC4P31431 198 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 SLC11A2P49281 568 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 SULT1E1P49888 294 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 GALCP54803 685 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 PITX1P78337 314 aaPredicted RBP16.13■□□□□ 0.17
DDB1-218ENST00000540784 ZC3H12AQ5D1E8 599 aaKnown RBP16.13■□□□□ 0.17
DDB1-218ENST00000540784 PLEKHA7Q6IQ23 1121 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 SND1Q7KZF4 910 aaKnown RBP eCLIP16.13■□□□□ 0.171e-6■■□□□ 13.4
DDB1-218ENST00000540784 CCDC170Q8IYT3 715 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 CPA6Q8N4T0 437 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 NT5C3BQ969T7 300 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 AZIN2Q96A70 460 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 ZNF653Q96CK0 615 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 SLC39A13Q96H72 371 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 ECT2Q9H8V3 914 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 MRPL47Q9HD33 250 aaKnown RBP16.13■□□□□ 0.17
DDB1-218ENST00000540784 HPS4Q9NQG7 708 aa16.13■□□□□ 0.17
DDB1-218ENST00000540784 NUP210Q8TEM1 1887 aaPredicted RBP16.12■□□□□ 0.17
DDB1-218ENST00000540784 IRAK2O43187 625 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 APOEP02649 317 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 H2AFZP0C0S5 128 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 GLULP15104 373 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 GPD1P21695 349 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 CCR1P32246 355 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 CHKAP35790 457 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 MLLT6P55198 1093 aaPredicted RBP16.12■□□□□ 0.17
DDB1-218ENST00000540784 GSDMDP57764 484 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 AMPD2Q01433 879 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 DEUP1Q05D60 604 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 SIGLEC14Q08ET2 396 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 EIF4EBP2Q13542 120 aaPredicted RBP16.12■□□□□ 0.17
DDB1-218ENST00000540784 GSE1Q14687 1217 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 CCDC14Q49A88 953 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 PPP1R15BQ5SWA1 713 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 TRNP1Q6NT89 227 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 Q6ZNB5 142 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 TRIM67Q6ZTA4 783 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 H2AFVQ71UI9 128 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 ANP32BQ92688 251 aaKnown RBP16.12■□□□□ 0.17
DDB1-218ENST00000540784 PGAP3Q96FM1 320 aaPredicted RBP16.12■□□□□ 0.17
DDB1-218ENST00000540784 SHDQ96IW2 340 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 FCRL2Q96LA5 508 aaPredicted RBP16.12■□□□□ 0.17
DDB1-218ENST00000540784 CFAP57Q96MR6 1250 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 TBCBQ99426 244 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 THAP2Q9H0W7 228 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 C8orf33Q9H7E9 229 aaPredicted RBP16.12■□□□□ 0.17
DDB1-218ENST00000540784 HEBP1Q9NRV9 189 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 SPTLC3Q9NUV7 552 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 CA14Q9ULX7 337 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 NENFQ9UMX5 172 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 SCINQ9Y6U3 715 aa16.12■□□□□ 0.17
DDB1-218ENST00000540784 ATMINO43313 823 aaPredicted RBP16.11■□□□□ 0.17
DDB1-218ENST00000540784 LATS1O95835 1130 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 DESP17661 470 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 TFE3P19532 575 aaPredicted RBP16.11■□□□□ 0.17
DDB1-218ENST00000540784 CYLC1P35663 651 aaPredicted RBP16.11■□□□□ 0.17
DDB1-218ENST00000540784 RPL7AP62424 266 aaKnown RBP16.11■□□□□ 0.17
DDB1-218ENST00000540784 ATP11AP98196 1134 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 PPP2R5DQ14738 602 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 DHCR24Q15392 516 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 C10orf76Q5T2E6 689 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 ADGRF1Q5T601 910 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 RHBDF2Q6PJF5 856 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 SIX5Q8N196 739 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 ATP6V0D2Q8N8Y2 350 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 MCEEQ96PE7 176 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 BAG1Q99933 345 aaPredicted RBP16.11■□□□□ 0.17
DDB1-218ENST00000540784 DDX50Q9BQ39 737 aaKnown RBP16.11■□□□□ 0.17
DDB1-218ENST00000540784 EPHX3Q9H6B9 360 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 WDCPQ9H6R7 721 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 SPHK2Q9NRA0 654 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 PAXBP1Q9Y5B6 917 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 EPN1Q9Y6I3 576 aaPredicted RBP16.11■□□□□ 0.17
DDB1-218ENST00000540784 PIAS3Q9Y6X2 628 aa16.11■□□□□ 0.17
DDB1-218ENST00000540784 TMEM191CA6NGB0 347 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 OTOL1A6NHN0 477 aaPredicted RBP16.1■□□□□ 0.17
DDB1-218ENST00000540784 KCNU1A8MYU2 1149 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 STK25O00506 426 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 DLL1O00548 723 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 ACSL4O60488 711 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 ENDOD1O94919 500 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 MOCS2O96007 188 aaPredicted RBP16.1■□□□□ 0.17
DDB1-218ENST00000540784 ADH1CP00326 375 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 CYP1A2P05177 515 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 FECHP22830 423 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 RDXP35241 583 aaKnown RBP16.1■□□□□ 0.17
DDB1-218ENST00000540784 MAGEA1P43355 309 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 PTPN9P43378 593 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 CXCR3P49682 368 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 ZNF143P52747 638 aaPredicted RBP16.1■□□□□ 0.17
DDB1-218ENST00000540784 PRKCQQ04759 706 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 MTA1Q13330 715 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 SPA17Q15506 151 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 MLF2Q15773 248 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms