RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 EFEMP1Q12805 493 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 GEN1Q17RS7 908 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 FOXD4L6Q3SYB3 417 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-211ENST00000540408 KMT5BQ4FZB7 885 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 FOXD4L5Q5VV16 416 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-211ENST00000540408 FYB2Q5VWT5 728 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 FOXD4L3Q6VB84 417 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-211ENST00000540408 CCNI2Q6ZMN8 369 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-211ENST00000540408 INTS8Q75QN2 995 aaKnown RBP13.1□□□□□ -0.31
COPS7A-211ENST00000540408 RSRC2Q7L4I2 434 aaKnown RBP13.1□□□□□ -0.31
COPS7A-211ENST00000540408 GLRX5Q86SX6 157 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 TTC39CQ8N584 583 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 DDI1Q8WTU0 396 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 FOXD4L4Q8WXT5 416 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-211ENST00000540408 CCDC47Q96A33 483 aaKnown RBP13.1□□□□□ -0.31
COPS7A-211ENST00000540408 HEXIM2Q96MH2 286 aaKnown RBP13.1□□□□□ -0.31
COPS7A-211ENST00000540408 CDC6Q99741 560 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 DUSP16Q9BY84 665 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 CIPCQ9C0C6 399 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 KCTD10Q9H3F6 313 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 TM7SF3Q9NS93 570 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 ELOVL2Q9NXB9 296 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 KIAA1522Q9P206 1035 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-211ENST00000540408 SERTAD1Q9UHV2 236 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 PCOLCE2Q9UKZ9 415 aa13.1□□□□□ -0.31
COPS7A-211ENST00000540408 KLKB1P03952 638 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 MYL1P05976 194 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 EPHX1P07099 455 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 HSP90AA1P07900 732 aaKnown RBP13.09□□□□□ -0.31
COPS7A-211ENST00000540408 IGF2RP11717 2491 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 ENPP2Q13822 863 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 ZNF234Q14588 700 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 SERPINA13PQ6UXR4 307 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 SCD5Q86SK9 330 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 DENND1CQ8IV53 801 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 GRAMD1CQ8IYS0 662 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 KIAA0895Q8NCT3 520 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 RHBDD1Q8TEB9 315 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 PAGE5Q96GU1 130 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 TWNKQ96RR1 684 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 NIF3L1Q9GZT8 377 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 PCED1AQ9H1Q7 454 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 MARCH2Q9P0N8 246 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 EIF2B4Q9UI10 523 aaKnown RBP13.09□□□□□ -0.31
COPS7A-211ENST00000540408 AGO1Q9UL18 857 aaKnown RBP13.09□□□□□ -0.31
COPS7A-211ENST00000540408 PLA2G4CQ9UP65 541 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 USP3Q9Y6I4 520 aa13.09□□□□□ -0.31
COPS7A-211ENST00000540408 CACNA1EQ15878 2313 aa13.08□□□□□ -0.31
COPS7A-211ENST00000540408 KCNJ18B7U540 433 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 FLRT2O43155 660 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 KLRC4O43908 158 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 CBFA2T3O75081 653 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 CILPO75339 1184 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 IGLV3-19P01714 112 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 CAPNS1P04632 268 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 ZSCAN22P10073 491 aaPredicted RBP13.08□□□□□ -0.32
COPS7A-211ENST00000540408 RPL13P26373 211 aaKnown RBP13.08□□□□□ -0.32
COPS7A-211ENST00000540408 GCLMP48507 274 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 AFF3P51826 1226 aaKnown RBP13.08□□□□□ -0.32
COPS7A-211ENST00000540408 TEAD4Q15561 434 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 HLA-BQ31612 363 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 ZNF394Q53GI3 561 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
COPS7A-211ENST00000540408 C19orf48Q6RUI8 117 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 CPXM2Q8N436 756 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 ENGASEQ8NFI3 743 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 TAS1R2Q8TE23 839 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 SNX19Q92543 992 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 PIWIL1Q96J94 861 aaKnown RBP13.08□□□□□ -0.32
COPS7A-211ENST00000540408 UBXN6Q9BZV1 441 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 USP25Q9UHP3 1055 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 TRAF3IP3Q9Y228 551 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 GPSM3Q9Y4H4 160 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 PCDHGB2Q9Y5G2 931 aa13.08□□□□□ -0.32
COPS7A-211ENST00000540408 SLC12A8A0AV02 714 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 NR2F2P24468 414 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 PSMC2P35998 433 aaKnown RBP13.07□□□□□ -0.32
COPS7A-211ENST00000540408 HARS2P49590 506 aaKnown RBP13.07□□□□□ -0.32
COPS7A-211ENST00000540408 COPAP53621 1224 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 ZNF445P59923 1031 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 ENPEPQ07075 957 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 MPPE1Q53F39 396 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 SLCO6A1Q86UG4 719 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 FAM124AQ86V42 546 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 OR2T3Q8NH03 318 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 PLD4Q96BZ4 506 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 TMEM176AQ96HP8 235 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 FAXDC2Q96IV6 333 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 MMRN2Q9H8L6 949 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 IL21RQ9HBE5 538 aa13.07□□□□□ -0.32
COPS7A-211ENST00000540408 APOBEC3GQ9HC16 384 aaKnown RBP13.07□□□□□ -0.32
COPS7A-211ENST00000540408 OLA1Q9NTK5 396 aaKnown RBP13.07□□□□□ -0.32
COPS7A-211ENST00000540408 ATRXP46100 2492 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 ZZEF1O43149 2961 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 AKAP13Q12802 2813 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 A0A1B0GVT2 93 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 ACTN4O43707 911 aaKnown RBP13.06□□□□□ -0.32
COPS7A-211ENST00000540408 F13A1P00488 732 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 CSNK1EP49674 416 aaKnown RBP13.06□□□□□ -0.32
COPS7A-211ENST00000540408 YWHAGP61981 247 aaKnown RBP eCLIP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms