RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 NHEJ1Q9H9Q4 299 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 ARHGEF3Q9NR81 526 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 COX16Q9P0S2 106 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 CALCOCO1Q9P1Z2 691 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 AGO1Q9UL18 857 aaKnown RBP13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 NENFQ9UMX5 172 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 TLR6Q9Y2C9 796 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 TMEM221A6NGB7 291 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 C2CD4BA6NLJ0 364 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 SIGLEC16A6NMB1 481 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 M0R296 226 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 AKR1B10O60218 316 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 NFATC1O95644 943 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 ABCB4P21439 1286 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 GBP1P32455 592 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 RFC1P35251 1148 aaPredicted RBP13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 HARS2P49590 506 aaKnown RBP13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 RING1Q06587 406 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 NME3Q13232 169 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 NNTQ13423 1086 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 DHCR24Q15392 516 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 MLF2Q15773 248 aaPredicted RBP13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 SLC18A3Q16572 532 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 SLC25A52Q3SY17 297 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 ZC3H12AQ5D1E8 599 aaKnown RBP13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 PPP1R15BQ5SWA1 713 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 PLEKHA7Q6IQ23 1121 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 ALKBH5Q6P6C2 394 aaKnown RBP13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 TPRG1Q6ZUI0 275 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 CPA6Q8N4T0 437 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 NT5C3BQ969T7 300 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 ZNF653Q96CK0 615 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 OTUB2Q96DC9 234 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 MCEEQ96PE7 176 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 DDIT4Q9NX09 232 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 RRN3Q9NYV6 651 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 IMPACTQ9P2X3 320 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 MYO1AQ9UBC5 1043 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 CNOT8Q9UFF9 292 aaKnown RBP13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 STAP1Q9ULZ2 295 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 ZNF510Q9Y2H8 683 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 PIAS3Q9Y6X2 628 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 KIAA1549LQ6ZVL6 1849 aa13.23□□□□□ -0.29
TSPAN9-207ENST00000539631 SHISA7A6NL88 538 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 PDGFBP01127 241 aaPredicted RBP13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 CYP17A1P05093 508 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 PDGFRAP16234 1089 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 GPD1P21695 349 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 ATXN1P54253 815 aaKnown RBP13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 VCPP55072 806 aaKnown RBP13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 RPL7AP62424 266 aaKnown RBP13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 PRKCQQ04759 706 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 DEUP1Q05D60 604 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 C15orf59Q2T9L4 293 aaPredicted RBP13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 CCDC14Q49A88 953 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 RAB6CQ53S08 254 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 NUGGCQ68CJ6 796 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 RHBDF2Q6PJF5 856 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 TMEM25Q86YD3 366 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 UNC45BQ8IWX7 931 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 CHFRQ96EP1 664 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 TRIM11Q96F44 468 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 PGAP3Q96FM1 320 aaPredicted RBP13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 CCDC42Q96M95 316 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 PANX2Q96RD6 677 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 RAB6CQ9H0N0 254 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 THAP2Q9H0W7 228 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 C8orf33Q9H7E9 229 aaPredicted RBP13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 PIGVQ9NUD9 493 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 SPTLC3Q9NUV7 552 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 PARVAQ9NVD7 372 aa13.22□□□□□ -0.29
TSPAN9-207ENST00000539631 GOLGA6L7A0A1B0GV03 622 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 FAM86C2PA6NEL3 165 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 SPECC1L-ADORA2AF8WAN1 911 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 TRDMT1O14717 391 aaKnown RBP13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 ACSL4O60488 711 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 MOCS2O96007 188 aaPredicted RBP13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 APOEP02649 317 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 MYBL1P10243 752 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 CD72P21854 359 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 SDC4P31431 198 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 CTHP32929 405 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 GJA4P35212 333 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 GALCP54803 685 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 STARD6P59095 220 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 ATP11AP98196 1134 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 OGDHQ02218 1023 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 NR1H3Q13133 447 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 MAMLD1Q13495 774 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 CDO1Q16878 200 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 GAB4Q2WGN9 574 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 LY6G5CQ5SRR4 150 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 SH3PXD2AQ5TCZ1 1133 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 DCUN1D2Q6PH85 259 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 TPGS1Q6ZTW0 290 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 BNIPLQ7Z465 357 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 RNF34Q969K3 372 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 ARHGEF26Q96DR7 871 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 PACSIN1Q9BY11 444 aa13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 SPHK2Q9NRA0 654 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms