RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 PPP1R16BQ96T49 567 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 GORASP1Q9BQQ3 440 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 ZNF180Q9UJW8 692 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 GPD1P21695 349 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 MSLNQ13421 630 aaPredicted RBP20.97■□□□□ 0.95
TMEM260-203ENST00000539559 EFHC1Q5JVL4 640 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 ZPBP2Q6X784 338 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 FAM183BPQ6ZVS7 135 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 TRAPPC12Q8WVT3 735 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 DCPSQ96C86 337 aaKnown RBP20.97■□□□□ 0.95
TMEM260-203ENST00000539559 MCRS1Q96EZ8 462 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 CDHR1Q96JP9 859 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 KLC2Q9H0B6 622 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 TXNDC9O14530 226 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 ARRB2P32121 409 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 GPD2P43304 727 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 ZNF143P52747 638 aaPredicted RBP20.96■□□□□ 0.95
TMEM260-203ENST00000539559 AP3M2P53677 418 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 DLG1Q12959 904 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 CCNIQ14094 377 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 N4BP2L1Q5TBK1 243 aaPredicted RBP20.96■□□□□ 0.95
TMEM260-203ENST00000539559 MAP1SQ66K74 1059 aaPredicted RBP20.96■□□□□ 0.95
TMEM260-203ENST00000539559 DHDDSQ86SQ9 333 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 ANKRD36BP1Q96IX9 119 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 SIGLEC10Q96LC7 697 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 NLRP4Q96MN2 994 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 SPATA16Q9BXB7 569 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 TEX13BQ9BXU2 312 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 KCNG1Q9UIX4 513 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 EMCNQ9ULC0 261 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 PARP14Q460N5 1801 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 ENDOD1O94919 500 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 ITGB3P05106 788 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 TFE3P19532 575 aaPredicted RBP20.96■□□□□ 0.95
TMEM260-203ENST00000539559 CYP3A5P20815 502 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 LAMTOR4Q0VGL1 99 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 TEDDM1Q5T9Z0 273 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 TMCO4Q5TGY1 634 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 BSPRYQ5W0U4 402 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 CASC4Q6P4E1 433 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 SULF1Q8IWU6 871 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 C1orf127Q8N9H9 656 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 FAM172AQ8WUF8 416 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 THAP1Q9NVV9 213 aa20.96■□□□□ 0.95
TMEM260-203ENST00000539559 CRHR1P34998 444 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 ATXN1P54253 815 aaKnown RBP20.95■□□□□ 0.94
TMEM260-203ENST00000539559 GBE1Q04446 702 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 TFDP2Q14188 446 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 LIN52Q52LA3 116 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 PPM1JQ5JR12 505 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 HPS6Q86YV9 775 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 EGFL6Q8IUX8 553 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 C12orf29Q8N999 325 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 PPP2R3CQ969Q6 453 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 NIFKQ9BYG3 293 aaKnown RBP20.95■□□□□ 0.94
TMEM260-203ENST00000539559 PHIPQ8WWQ0 1821 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 A6NJR5 290 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 INO80B-WBP1J3KQ70 363 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 APOL1O14791 398 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 OR6B1O95007 311 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 NCF2P19878 526 aaPredicted RBP20.95■□□□□ 0.94
TMEM260-203ENST00000539559 UBA1P22314 1058 aaKnown RBP20.95■□□□□ 0.94
TMEM260-203ENST00000539559 SLC1A6P48664 564 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 CDK7P50613 346 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 VGLL4Q14135 290 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 TARBP2Q15633 366 aaKnown RBP20.95■□□□□ 0.94
TMEM260-203ENST00000539559 SH3D19Q5HYK7 790 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 WDR78Q5VTH9 848 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 PDSS2Q86YH6 399 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 GSDMBQ8TAX9 411 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 INO80BQ9C086 356 aaPredicted RBP20.95■□□□□ 0.94
TMEM260-203ENST00000539559 ZNF358Q9NW07 568 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 SIP14410 1827 aa20.95■□□□□ 0.94
TMEM260-203ENST00000539559 SBF1O95248 1867 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 WDR27A2RRH5 827 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 C2CD4BA6NLJ0 364 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 SIN3BO75182 1162 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 FGF3P11487 239 aaPredicted RBP20.94■□□□□ 0.94
TMEM260-203ENST00000539559 SERPINB6P35237 376 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 STAT5BP51692 787 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 WASHC5Q12768 1159 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 RABGAP1LQ5R372 815 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 MBLAC2Q68D91 279 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 PIWIL2Q8TC59 973 aaKnown RBP20.94■□□□□ 0.94
TMEM260-203ENST00000539559 AGR3Q8TD06 166 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 AZIN2Q96A70 460 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 EPAS1Q99814 870 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 CNPY3Q9BT09 278 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 OXCT2Q9BYC2 517 aaPredicted RBP20.94■□□□□ 0.94
TMEM260-203ENST00000539559 FAM192AQ9GZU8 254 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 ACSS2Q9NR19 701 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 MAN1C1Q9NR34 630 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 BTBD7Q9P203 1132 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 MFHAS1Q9Y4C4 1052 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 TRDMT1O14717 391 aaKnown RBP20.94■□□□□ 0.94
TMEM260-203ENST00000539559 TPP1O14773 563 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 ADCY6O43306 1168 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 AOC1P19801 751 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 CUL3Q13618 768 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 LAMB3Q13751 1172 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms