RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 DCAF6Q58WW2 860 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 C10orf120Q5SQS8 335 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 PTCRAQ6ISU1 281 aaPredicted RBP17.94■□□□□ 0.46
CLN6-202ENST00000538696 KLHDC10Q6PID8 442 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 TADA2BQ86TJ2 420 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 RNF139Q8WU17 664 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 RXFP2Q8WXD0 754 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 TSC1Q92574 1164 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 CYP2S1Q96SQ9 504 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 CDK5RAP1Q96SZ6 601 aaKnown RBP17.94■□□□□ 0.46
CLN6-202ENST00000538696 DDX23Q9BUQ8 820 aaKnown RBP17.94■□□□□ 0.46
CLN6-202ENST00000538696 ADAM33Q9BZ11 813 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 SMOC2Q9H3U7 446 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 SLITRK6Q9H5Y7 841 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 OLA1Q9NTK5 396 aaKnown RBP17.94■□□□□ 0.46
CLN6-202ENST00000538696 SFMBT1Q9UHJ3 866 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 USTQ9Y2C2 406 aa17.94■□□□□ 0.46
CLN6-202ENST00000538696 CTAGE15A4D2H0 777 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 CEP104O60308 925 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 PRAMEF12O95522 483 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 IGLV3-25P01717 112 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 CKMP06732 381 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 CTAGE8P0CG41 777 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 MBL2P11226 248 aaPredicted RBP17.93■□□□□ 0.46
CLN6-202ENST00000538696 HDCP19113 662 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 TFE3P19532 575 aaPredicted RBP17.93■□□□□ 0.46
CLN6-202ENST00000538696 GBP2P32456 591 aaPredicted RBP17.93■□□□□ 0.46
CLN6-202ENST00000538696 ATP5C1P36542 298 aaKnown RBP17.93■□□□□ 0.46
CLN6-202ENST00000538696 SLC1A1P43005 524 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 PEX5P50542 639 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 SMAD2Q15796 467 aaKnown RBP17.93■□□□□ 0.46
CLN6-202ENST00000538696 CCDC181Q5TID7 509 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 ZNF572Q7Z3I7 529 aaPredicted RBP17.93■□□□□ 0.46
CLN6-202ENST00000538696 CTAGE6Q86UF2 777 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 CTAGE4Q8IX94 777 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 CMTM8Q8IZV2 173 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 UBL4BQ8N7F7 174 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 ZSCAN18Q8TBC5 510 aaPredicted RBP17.93■□□□□ 0.46
CLN6-202ENST00000538696 ADAM32Q8TC27 787 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 ZFRQ96KR1 1074 aaKnown RBP17.93■□□□□ 0.46
CLN6-202ENST00000538696 CFAP57Q96MR6 1250 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 NPY6RQ99463 290 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 NACA2Q9H009 215 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 SMG9Q9H0W8 520 aaKnown RBP17.93■□□□□ 0.46
CLN6-202ENST00000538696 THEGQ9P2T0 379 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 ZMYM5Q9UJ78 669 aa17.93■□□□□ 0.46
CLN6-202ENST00000538696 MSI1O43347 362 aaKnown RBP17.92■□□□□ 0.46
CLN6-202ENST00000538696 IL9P15248 144 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 PDGFRAP16234 1089 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 PSMA2P25787 234 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 PTPN9P43378 593 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 SULT1E1P49888 294 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 SLC7A9P82251 487 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 C2orf54Q08AI8 447 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 ZNF211Q13398 564 aaPredicted RBP17.92■□□□□ 0.46
CLN6-202ENST00000538696 C15orf59Q2T9L4 293 aaPredicted RBP17.92■□□□□ 0.46
CLN6-202ENST00000538696 CCDC14Q49A88 953 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 TEX35Q5T0J7 233 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 MIB1Q86YT6 1006 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 RASGEF1CQ8N431 466 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 NT5C3BQ969T7 300 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 TBCBQ99426 244 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 FAM204AQ9H8W3 233 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.92■□□□□ 0.462e-9■■■■■ 36.3
CLN6-202ENST00000538696 GDE1Q9NZC3 331 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 MARCH2Q9P0N8 246 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 CALCOCO1Q9P1Z2 691 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 DNMT3LQ9UJW3 386 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 STAP1Q9ULZ2 295 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 PCDHA3Q9Y5H8 950 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 CPQQ9Y646 472 aa17.92■□□□□ 0.46
CLN6-202ENST00000538696 SPTBN5Q9NRC6 3674 aaKnown RBP17.91■□□□□ 0.46
CLN6-202ENST00000538696 CCDC66A2RUB6 948 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 IRAK2O43187 625 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 TRUB2O95900 331 aaKnown RBP17.91■□□□□ 0.46
CLN6-202ENST00000538696 SP100P23497 879 aaPredicted RBP17.91■□□□□ 0.46
CLN6-202ENST00000538696 WEE1P30291 646 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 SDC4P31431 198 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 AVPR1AP37288 418 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 PAFAH1B1P43034 410 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 ZNF143P52747 638 aaPredicted RBP17.91■□□□□ 0.46
CLN6-202ENST00000538696 ZXDBP98169 803 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 PUS10Q3MIT2 529 aaKnown RBP17.91■□□□□ 0.46
CLN6-202ENST00000538696 SLC25A52Q3SY17 297 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 FAM78AQ5JUQ0 283 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 AADACL2Q6P093 401 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 CC2D1AQ6P1N0 951 aaPredicted RBP17.91■□□□□ 0.46
CLN6-202ENST00000538696 BNIPLQ7Z465 357 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 NIPA2Q8N8Q9 360 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 NOA1Q8NC60 698 aaKnown RBP17.91■□□□□ 0.46
CLN6-202ENST00000538696 ADAMTS19Q8TE59 1207 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 FNIP1Q8TF40 1166 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 UBE2Q2Q8WVN8 375 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 ASB16Q96NS5 453 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 SERPINB11Q96P15 392 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 PHF7Q9BWX1 381 aaPredicted RBP17.91■□□□□ 0.46
CLN6-202ENST00000538696 KLF16Q9BXK1 252 aaPredicted RBP17.91■□□□□ 0.46
CLN6-202ENST00000538696 CARD9Q9H257 536 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 SMPD4Q9NXE4 827 aa17.91■□□□□ 0.46
CLN6-202ENST00000538696 RRN3Q9NYV6 651 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms