RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 TAF1CQ15572 869 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-208ENST00000538570 FAM98BQ52LJ0 330 aaKnown RBP10.21□□□□□ -0.78
COL4A6-208ENST00000538570 PDZK1Q5T2W1 519 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 LRRC74BQ6ZQY2 392 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 MICALL2Q8IY33 904 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 ZNF512BQ96KM6 892 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-208ENST00000538570 GANQ9H2C0 597 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 WBP11Q9Y2W2 641 aaKnown RBP10.21□□□□□ -0.78
COL4A6-208ENST00000538570 PEX1O43933 1283 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 TNFAIP8O95379 198 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 F9P00740 461 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 ITGALP20701 1170 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 CDC42EP5Q6NZY7 148 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 PRMT9Q6P2P2 845 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 L3MBTL3Q96JM7 780 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-208ENST00000538570 PACSIN1Q9BY11 444 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 PLAGL2Q9UPG8 496 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 AGKQ53H12 422 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 ZNRF3Q9ULT6 936 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 MED14O60244 1454 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 H7C4K7 107 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 PDE9AO76083 593 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 RASA1P20936 1047 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 PIK3R1P27986 724 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 SERPINH1P50454 418 aaKnown RBP10.2□□□□□ -0.78
COL4A6-208ENST00000538570 RPS6KA3P51812 740 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 OXCT1P55809 520 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 ITGADQ13349 1161 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 AMHR2Q16671 573 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 DGKKQ5KSL6 1271 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 CLEC10AQ8IUN9 316 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 EPHX4Q8IUS5 362 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 FICDQ9BVA6 458 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 CHID1Q9BWS9 393 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 GPAMQ9HCL2 828 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 POLG2Q9UHN1 485 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 DUSP12Q9UNI6 340 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 ACOT9Q9Y305 439 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 A0A087X0T9 212 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 TTLL13PA6NNM8 815 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 FOXN3O00409 490 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-208ENST00000538570 UBDO15205 165 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 GLP2RO95838 553 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 FAM228BP0C875 321 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 PBLDP30039 288 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-208ENST00000538570 CCNG1P51959 295 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 UBASH3BQ8TF42 649 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 KAT2BQ92831 832 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 CITED4Q96RK1 184 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 C12orf4Q9NQ89 552 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 PDGFCQ9NRA1 345 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 MRPL39Q9NYK5 338 aaKnown RBP10.2□□□□□ -0.78
COL4A6-208ENST00000538570 COPG2Q9UBF2 871 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 SMIM31A0A1B0GVY4 71 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 TRIM43BA6NCK2 446 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 CYP11B2P19099 503 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 TRIM28Q13263 835 aaKnown RBP10.2□□□□□ -0.78
COL4A6-208ENST00000538570 CSHL1Q14406 222 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 TMEM132BQ14DG7 1078 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 ZNF284Q2VY69 593 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 KCNT1Q5JUK3 1230 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 KLHL17Q6TDP4 642 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 SPOCD1Q6ZMY3 1216 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 CD302Q8IX05 232 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 CDK20Q8IZL9 346 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 EID3Q8N140 333 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 FAM172AQ8WUF8 416 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 COLEC11Q9BWP8 271 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 ZNF518BQ9C0D4 1074 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 ZNF70Q9UC06 446 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-208ENST00000538570 ADGRB3O60242 1522 aa10.2□□□□□ -0.78
COL4A6-208ENST00000538570 AFF2P51816 1311 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 CLTBP09497 229 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 TPBGLP0DKB5 382 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 GARTP22102 1010 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 TCF7P36402 384 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ATP12AP54707 1039 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 YWHAZP63104 245 aaKnown RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ABATP80404 500 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 NFIXQ14938 502 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ZCCHC8Q6NZY4 707 aaKnown RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 HHIPL2Q6UWX4 724 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 DEFB107AQ8IZN7 70 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 KYQ8NBH2 561 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 GDPD5Q8WTR4 605 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 GPRASP2Q96D09 838 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 MAGED4Q96JG8 741 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 LNPEPQ9UIQ6 1025 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ZC3H11AO75152 810 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 CYP11B1P15538 503 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ELF3P78545 371 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 TGM3Q08188 693 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 MPP3Q13368 585 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 EFR3AQ14156 821 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 PCNX4Q63HM2 1172 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 FAM117BQ6P1L5 589 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 OSCP1Q8WVF1 389 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 LENG1Q96BZ8 264 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 VMP1Q96GC9 406 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 CRAMP1Q96RY5 1269 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms