RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RNF14Q9UBS8 474 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 LSM7Q9UK45 103 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 AP4E1Q9UPM8 1137 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MRPS23Q9Y3D9 190 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PLXNA3P51805 1871 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MTCL1Q9Y4B5 1905 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PATJQ8NI35 1801 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TMEM265A0A087WTH1 108 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 A0A1W2PRU2 124 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 H3BRJ5 948 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PGRMC1O00264 195 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MDM4O15151 490 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 DDX3YO15523 660 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MSI1O43347 362 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 FYNP06241 537 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 IRF1P10914 325 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 HMGA1P17096 107 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TFE3P19532 575 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 HOXA9P31269 272 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 AVPR1AP37288 418 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 AIF1P55008 147 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 HDAC4P56524 1084 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 COPS2P61201 443 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CYP4F8P98187 520 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MTA1Q13330 715 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 LLGL1Q15334 1064 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TRIP4Q15650 581 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ATP13A4Q4VNC1 1196 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ZC3H12AQ5D1E8 599 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 BRMS1LQ5PSV4 323 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 GPR158Q5T848 1215 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TRNP1Q6NT89 227 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 GRASPQ7Z6J2 395 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ADAT2Q7Z6V5 191 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 C12orf76Q8N812 135 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MAB21L3Q8N8X9 362 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TEKT4Q8WW24 435 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CENPIQ92674 756 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ACSF2Q96CM8 615 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 LRCH3Q96II8 777 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 DDX50Q9BQ39 737 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 HEMGNQ9BXL5 484 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CARD9Q9H257 536 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PIGVQ9NUD9 493 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 GPATCH2LQ9NWQ4 482 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 LMCD1Q9NZU5 365 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TLR6Q9Y2C9 796 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SH3BP1Q9Y3L3 701 aa11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RANBP2P49792 3224 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-211ENST00000538363 FAM92AA1XBS5 289 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CTAGE15A4D2H0 777 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 EEF2KO00418 725 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 KRIT1O00522 736 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CES2O00748 559 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ZNF185O15231 689 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TJP3O95049 919 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TBX18O95935 607 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 FGGP02679 453 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 F11P03951 625 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RHOP08100 348 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CTAGE8P0CG41 777 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PYGMP11217 842 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 GJA1P17302 382 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 KDELR1P24390 212 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 DDX6P26196 483 aaKnown RBP eCLIP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ADRA1BP35368 520 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MARCKSL1P49006 195 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SLC11A2P49281 568 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CXCR3P49682 368 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ATXN1P54253 815 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 DYNLT1P63172 113 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PITX1P78337 314 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TFDP2Q14188 446 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SKIV2LQ15477 1246 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ATAT1Q5SQI0 421 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 NUGGCQ68CJ6 796 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TXNDC8Q6A555 127 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RWDD4Q6NW29 188 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MSANTD2Q6P1R3 559 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SPOCD1Q6ZMY3 1216 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 BHLHA9Q7RTU4 235 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CTAGE6Q86UF2 777 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CCDC117Q8IWD4 279 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CTAGE4Q8IX94 777 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CCDC185Q8N715 623 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ARL14EPQ8N8R7 260 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 EPAS1Q99814 870 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SNRNP25Q9BV90 132 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ZNF334Q9HCZ1 680 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 HCFC1R1Q9NWW0 138 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 OSER1Q9NX31 292 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SMPD4Q9NXE4 827 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CLDND1Q9NY35 253 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 DNMT3BQ9UBC3 853 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 FZD10Q9ULW2 581 aa11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 HBS1LQ9Y450 684 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ZNF638Q14966 1978 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TYW5A2RUC4 315 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms