RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CASZ1Q86V15 1759 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 C3P01024 1663 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 GTF2E2P29084 291 aaKnown RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 FEN1P39748 380 aaKnown RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 GSSP48637 474 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 SCNN1GP51170 649 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 SEC24CP53992 1094 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 HIRAP54198 1017 aaPredicted RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 SDHAF4Q5VUM1 108 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 SLC27A1Q6PCB7 646 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 TRIM69Q86WT6 500 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 NOA1Q8NC60 698 aaKnown RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 HELQQ8TDG4 1101 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 CASP10Q92851 521 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 CLIP3Q96DZ5 547 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 TPD52L3Q96J77 140 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 CATSPER2Q96P56 530 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 MRPL17Q9NRX2 175 aaKnown RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 NMRK1Q9NWW6 199 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 SH3BP4Q9P0V3 963 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 TBC1D3BA6NDS4 549 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 XYLBO75191 536 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 WBP4O75554 376 aaKnown RBP11.49□□□□□ -0.57
LINC00346-201ENST00000538077 SPAG6O75602 509 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 FYNP06241 537 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 PPATQ06203 517 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 SCN3BQ9NY72 215 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 PHTF1Q9UMS5 762 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 SLC27A5Q9Y2P5 690 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 HES2Q9Y543 173 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 BAIAP3O94812 1187 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 PRKAA1Q13131 559 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 P3H2Q8IVL5 708 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 NACC2Q96BF6 587 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 MYOCQ99972 504 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 BPIFA1Q9NP55 256 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 SOHLH2Q9NX45 425 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 RAMP2O60895 175 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 AKAP3O75969 853 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 USP1O94782 785 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 BGNP21810 368 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 MGAT1P26572 445 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 RRM2P31350 389 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 SERPINB10P48595 397 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 YWHAZP63104 245 aaKnown RBP11.49□□□□□ -0.57
LINC00346-201ENST00000538077 C4orf19Q8IY42 314 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 KCNK16Q96T55 309 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 BBS2Q9BXC9 721 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 CERS4Q9HA82 394 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 BARX2Q9UMQ3 279 aaPredicted RBP11.49□□□□□ -0.57
LINC00346-201ENST00000538077 DNAJC16Q9Y2G8 782 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 GAKO14976 1311 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 WTIPA6NIX2 430 aaPredicted RBP11.49□□□□□ -0.57
LINC00346-201ENST00000538077 FOXP2O15409 715 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 PPP1R37O75864 691 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 ZNF23P17027 643 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 IRAK1BP1Q5VVH5 260 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 CYP20A1Q6UW02 462 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 C4orf22Q6V702 233 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 ZNF571Q7Z3V5 609 aaPredicted RBP11.49□□□□□ -0.57
LINC00346-201ENST00000538077 NSL1Q96IY1 281 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 TBL1YQ9BQ87 522 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 F8VZ95 297 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 GLRA3O75311 464 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 DAB1O75553 588 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 F9P00740 461 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 CTSEP14091 401 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 STIP1P31948 543 aaKnown RBP11.49□□□□□ -0.57
LINC00346-201ENST00000538077 RAB27AP51159 221 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 MARC1Q5VT66 337 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 TKTL2Q9H0I9 626 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 IMPAD1Q9NX62 359 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 ZNF112Q9UJU3 913 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 SHOC2Q9UQ13 582 aa11.49□□□□□ -0.57
LINC00346-201ENST00000538077 MEI4A8MW99 385 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 MTA2O94776 668 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 LGALS2P05162 132 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 GATAD2AQ86YP4 633 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 GAD1Q99259 594 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 ELOVL6Q9H5J4 265 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 LRRC40Q9H9A6 602 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 TBC1D13Q9NVG8 400 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 IGF2BP3O00425 579 aaKnown RBP eCLIP11.48□□□□□ -0.57
LINC00346-201ENST00000538077 SETMARQ53H47 684 aaPredicted RBP11.48□□□□□ -0.57
LINC00346-201ENST00000538077 AGBL2Q5U5Z8 902 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 TMEM154Q6P9G4 183 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 PAWRQ96IZ0 340 aaKnown RBP11.48□□□□□ -0.57
LINC00346-201ENST00000538077 CDK5RAP1Q96SZ6 601 aaKnown RBP11.48□□□□□ -0.57
LINC00346-201ENST00000538077 ANKRD63C9JTQ0 380 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 SMIM10L2AP0DMW4 78 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 SMIM10L2BP0DMW5 78 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 COPAP53621 1224 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 AASDHQ4L235 1098 aaPredicted RBP11.48□□□□□ -0.57
LINC00346-201ENST00000538077 TRPM8Q7Z2W7 1104 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 EFL1Q7Z2Z2 1120 aaKnown RBP11.48□□□□□ -0.57
LINC00346-201ENST00000538077 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.48□□□□□ -0.57
LINC00346-201ENST00000538077 DENND1CQ8IV53 801 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 TEX9Q8N6V9 391 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 THAP11Q96EK4 314 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 NDEL1Q9GZM8 345 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms