RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 POLIQ9UNA4 740 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 ERVK-11Q9UQG0 969 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 TTLL3Q9Y4R7 772 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 C1orf232A0A0U1RR37 186 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 TISP43B9A030 160 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 STX16-NPEPL1H3BU86 382 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 ALOX15BO15296 676 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 MT-ND3P03897 115 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 CLK3P49761 638 aaKnown RBP11.02□□□□□ -0.64
RTN3-208ENST00000537981 PMS2P3Q13401 168 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 TRIM16LQ309B1 348 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 USP17L6PQ6QN14 398 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 CHST15Q7LFX5 561 aaPredicted RBP11.02□□□□□ -0.64
RTN3-208ENST00000537981 MIER3Q7Z3K6 550 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 FAM20CQ8IXL6 584 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 FBXO22Q8NEZ5 403 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 ZSCAN18Q8TBC5 510 aaPredicted RBP11.02□□□□□ -0.64
RTN3-208ENST00000537981 EPS8L1Q8TE68 723 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 USP13Q92995 863 aaPredicted RBP11.02□□□□□ -0.64
RTN3-208ENST00000537981 ARMC5Q96C12 935 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 APOPT1Q96IL0 206 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 DHRS4Q9BTZ2 278 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 NUF2Q9BZD4 464 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 TMEM117Q9H0C3 514 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 MRPL46Q9H2W6 279 aaKnown RBP11.02□□□□□ -0.64
RTN3-208ENST00000537981 POLE4Q9NR33 117 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 BMP2KQ9NSY1 1161 aaPredicted RBP11.02□□□□□ -0.64
RTN3-208ENST00000537981 SAE1Q9UBE0 346 aaPredicted RBP11.02□□□□□ -0.64
RTN3-208ENST00000537981 DAPK2Q9UIK4 370 aa11.02□□□□□ -0.64
RTN3-208ENST00000537981 ATP2A1O14983 1001 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 RNASEH2AO75792 299 aaKnown RBP11.02□□□□□ -0.65
RTN3-208ENST00000537981 MYO1DO94832 1006 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 SLITRK3O94933 977 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 IFNB1P01574 187 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 UBL4AP11441 157 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 ZNF26P17031 533 aaPredicted RBP11.02□□□□□ -0.65
RTN3-208ENST00000537981 IDUAP35475 653 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 THOP1P52888 689 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 PRAMEP78395 509 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 IFITM3Q01628 133 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 FMO1Q01740 532 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 PTK7Q13308 1070 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 WDR45BQ5MNZ6 344 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 RARS2Q5T160 578 aaKnown RBP11.02□□□□□ -0.65
RTN3-208ENST00000537981 C11orf74Q86VG3 221 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 OSTM1Q86WC4 334 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 IFNL2Q8IZJ0 200 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 FBXO36Q8NEA4 188 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 FAM110BQ8TC76 370 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 KBTBD7Q8WVZ9 684 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 JADE3Q92613 823 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 FAM84AQ96KN4 292 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 SLC29A1Q99808 456 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 SH3GL1Q99961 368 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 IFT122Q9HBG6 1241 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 C6orf50Q9HD87 102 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 SSU72Q9NP77 194 aaKnown RBP11.02□□□□□ -0.65
RTN3-208ENST00000537981 NOCTQ9UK39 431 aaKnown RBP11.02□□□□□ -0.65
RTN3-208ENST00000537981 RABGAP1Q9Y3P9 1069 aa11.02□□□□□ -0.65
RTN3-208ENST00000537981 CFAP99D6REC4 459 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 GIPC1O14908 333 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 MGEA5O60502 916 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 JAK1P23458 1154 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 ADSLP30566 484 aaPredicted RBP11.01□□□□□ -0.65
RTN3-208ENST00000537981 GMPRP36959 345 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 WASHC5Q12768 1159 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 BMPR2Q13873 1038 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 RNASEH2BQ5TBB1 312 aaKnown RBP11.01□□□□□ -0.65
RTN3-208ENST00000537981 EEPD1Q7L9B9 569 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 GPR141Q7Z602 305 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 RHPN2Q8IUC4 686 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 PDZD8Q8NEN9 1154 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 GMLQ99445 158 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 TMEM47Q9BQJ4 181 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 TMEM121Q9BTD3 319 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 BRIP1Q9BX63 1249 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 GCOM2Q9BZD3 368 aaPredicted RBP11.01□□□□□ -0.65
RTN3-208ENST00000537981 TP63Q9H3D4 680 aaPredicted RBP11.01□□□□□ -0.65
RTN3-208ENST00000537981 ALG2Q9H553 416 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 EPS8L2Q9H6S3 715 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 COQ10BQ9H8M1 238 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 RNF19AQ9NV58 838 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 PCDHGA11Q9Y5H2 935 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 PDXKO00764 312 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 PDE8AO60658 829 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 CLIC3O95833 236 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 CYP1A2P05177 515 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 TCN1P20061 433 aaPredicted RBP11.01□□□□□ -0.65
RTN3-208ENST00000537981 ARRB2P32121 409 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 TRAF2Q12933 501 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 MAPRE1Q15691 268 aaKnown RBP11.01□□□□□ -0.65
RTN3-208ENST00000537981 INAVAQ3KP66 663 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 PPM1LQ5SGD2 360 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 SYDE1Q6ZW31 735 aaPredicted RBP11.01□□□□□ -0.65
RTN3-208ENST00000537981 E2F7Q96AV8 911 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 ALPK1Q96QP1 1244 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 TMEM79Q9BSE2 394 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 HIPK3Q9H422 1215 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 SLC45A1Q9Y2W3 748 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 CPQQ9Y646 472 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms