RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ZC3H7BQ9UGR2 993 aaKnown RBP16.21■□□□□ 0.19
MKS1-204ENST00000537529 GABRQQ9UN88 632 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 ARL2BPQ9Y2Y0 163 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 SYNJ2BP-COX16A0A087WUM0 186 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 GSTA1P08263 222 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 THPOP40225 353 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 SCTRP47872 440 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 AIF1P55008 147 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 DAOAP59103 153 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 PTK7Q13308 1070 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 PDK4Q16654 411 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 KBTBD12Q3ZCT8 623 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 LRRN4Q8WUT4 740 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 HTR3CQ8WXA8 447 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 SMOQ99835 787 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 ARHGAP39Q9C0H5 1083 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 XAB2Q9HCS7 855 aaKnown RBP16.2■□□□□ 0.18
MKS1-204ENST00000537529 XPNPEP3Q9NQH7 507 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 CNGB3Q9NQW8 809 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 COX16Q9P0S2 106 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 CASTOR2A6NHX0 329 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 DNM1LO00429 736 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 CAPN9O14815 690 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 MFSD11O43934 449 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 METTL18O95568 372 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 MT-ND3P03897 115 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 ODC1P11926 461 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 FDFT1P37268 417 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 FLT3LGP49771 235 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 AFF1P51825 1210 aaKnown RBP16.2■□□□□ 0.18
MKS1-204ENST00000537529 PITX1P78337 314 aaPredicted RBP16.2■□□□□ 0.18
MKS1-204ENST00000537529 NME3Q13232 169 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 SEMA5AQ13591 1074 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 SEPT7Q16181 437 aaKnown RBP16.2■□□□□ 0.18
MKS1-204ENST00000537529 CNPY4Q8N129 248 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 C3orf58Q8NDZ4 430 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 SMARCD1Q96GM5 515 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 PCED1BQ96HM7 432 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 SLC9A7Q96T83 725 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 AGO3Q9H9G7 860 aaKnown RBP16.2■□□□□ 0.18
MKS1-204ENST00000537529 MFHAS1Q9Y4C4 1052 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 TTLL3Q9Y4R7 772 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 TIMM13Q9Y5L4 95 aaPredicted RBP16.2■□□□□ 0.18
MKS1-204ENST00000537529 TLL2Q9Y6L7 1015 aa16.2■□□□□ 0.18
MKS1-204ENST00000537529 A0A0A0MRY4 1105 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 MYBPHLA2RUH7 354 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 C9IYK1 514 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 TRDMT1O14717 391 aaKnown RBP16.19■□□□□ 0.18
MKS1-204ENST00000537529 TM9SF1O15321 606 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 ZNF623O75123 536 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 ADAMTS4O75173 837 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 ZNF189O75820 626 aaPredicted RBP16.19■□□□□ 0.18
MKS1-204ENST00000537529 MAGEA3P43357 314 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 TM4SF4P48230 202 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 SARNPP82979 210 aaKnown RBP16.19■□□□□ 0.18
MKS1-204ENST00000537529 SLC1A5Q15758 541 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 SPRED3Q2MJR0 410 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 SYPL2Q5VXT5 272 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 HFE2Q6ZVN8 426 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 METTL23Q86XA0 190 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 AGGF1Q8N302 714 aaeCLIP16.19■□□□□ 0.18
MKS1-204ENST00000537529 SLC7A14Q8TBB6 771 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 LRRC8CQ8TDW0 803 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 NTAN1Q96AB6 310 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 SPATA13Q96N96 652 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 PITPNM3Q9BZ71 974 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 PIGVQ9NUD9 493 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 PADI3Q9ULW8 664 aa16.19■□□□□ 0.18
MKS1-204ENST00000537529 EEF2KO00418 725 aaKnown RBP16.18■□□□□ 0.18
MKS1-204ENST00000537529 NRP1O14786 923 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 PIAS1O75925 651 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 VAV1P15498 845 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 CD52P31358 61 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 PDK1Q15118 436 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 PRKD1Q15139 912 aaPredicted RBP16.18■□□□□ 0.18
MKS1-204ENST00000537529 UPP1Q16831 310 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 RAB41Q5JT25 222 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 PACS2Q86VP3 889 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 SLC26A11Q86WA9 606 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 CCDC33Q8N5R6 958 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 RRN3Q9NYV6 651 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 PPP1R12AO14974 1030 aaPredicted RBP16.18■□□□□ 0.18
MKS1-204ENST00000537529 CREB3O43889 395 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 ASGR1P07306 291 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 PAX3P23760 479 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 CDK16Q00536 496 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 DPYSQ14117 519 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 TIGD5Q53EQ6 642 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 ANKRD20A2Q5SQ80 823 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 FAM182AQ5T1J6 154 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 ANKRD20A1Q5TYW2 823 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 ANKRD20A3Q5VUR7 823 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 LVRNQ6Q4G3 990 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 DENND5BQ6ZUT9 1274 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 GBP7Q8N8V2 638 aaPredicted RBP16.18■□□□□ 0.18
MKS1-204ENST00000537529 BANPQ8N9N5 519 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 RNF169Q8NCN4 708 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 PGBD4Q96DM1 585 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 ABCF3Q9NUQ8 709 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 PRKAG3Q9UGI9 489 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms