RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PCDHGC3Q9UN70 934 aa14.89□□□□□ -0.03
UBE3B-206ENST00000536398 INVSQ9Y283 1065 aa14.89□□□□□ -0.03
UBE3B-206ENST00000536398 HBS1LQ9Y450 684 aaKnown RBP14.89□□□□□ -0.03
UBE3B-206ENST00000536398 KIAA1549LQ6ZVL6 1849 aa14.89□□□□□ -0.03
UBE3B-206ENST00000536398 OTOGLQ3ZCN5 2332 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 AXIN1O15169 862 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 EPHB6O15197 1021 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 APBB3O95704 486 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 NCAM1P13591 858 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 UCHL3P15374 230 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 CHKAP35790 457 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 ACADSBP45954 432 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 HARS2P49590 506 aaKnown RBP14.88□□□□□ -0.03
UBE3B-206ENST00000536398 DGKGP49619 791 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 PITX1P78337 314 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-206ENST00000536398 TYRO3Q06418 890 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 CRY1Q16526 586 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 MEA1Q16626 185 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 EGFLAMQ63HQ2 1017 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 FAM217AQ8IXS0 508 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 C1orf131Q8NDD1 294 aaKnown RBP14.88□□□□□ -0.03
UBE3B-206ENST00000536398 TSTD1Q8NFU3 115 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 CCDC26Q8TAB7 109 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 DQX1Q8TE96 717 aaKnown RBP14.88□□□□□ -0.03
UBE3B-206ENST00000536398 FAM149B1Q96BN6 582 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 TPSD1Q9BZJ3 242 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 NCDNQ9UBB6 729 aa14.88□□□□□ -0.03
UBE3B-206ENST00000536398 GFRA2O00451 464 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 RPP40O75818 363 aaKnown RBP14.87□□□□□ -0.03
UBE3B-206ENST00000536398 IGLV3-27P01718 113 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 CNR2P34972 360 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 SGSHP51688 502 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 DGKEP52429 567 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 TBX4P57082 545 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 MYL5Q02045 173 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 GEN1Q17RS7 908 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 TAF3Q5VWG9 929 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 ANO7Q6IWH7 933 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 CAVIN1Q6NZI2 390 aaKnown RBP14.87□□□□□ -0.03
UBE3B-206ENST00000536398 CEP68Q76N32 757 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 TAC4Q86UU9 113 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 KBTBD6Q86V97 674 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 CPXM2Q8N436 756 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 FAM160A2Q8N612 972 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-206ENST00000536398 ZNF513Q8N8E2 541 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-206ENST00000536398 DDI1Q8WTU0 396 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 GAB3Q8WWW8 586 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 GOLGA1Q92805 767 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 MYEOVQ96EZ4 313 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 PPP1R13BQ96KQ4 1090 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 FCRL2Q96LA5 508 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-206ENST00000536398 GANQ9H2C0 597 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 LHX5Q9H2C1 402 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 EBF1Q9UH73 591 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 STOML2Q9UJZ1 356 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 STARD13Q9Y3M8 1113 aa14.87□□□□□ -0.03
UBE3B-206ENST00000536398 CCDC163A0A0D9SF12 145 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 WASH3PC4AMC7 463 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 GRAP2O75791 330 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 ERBB2P04626 1255 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 CYP11B1P15538 503 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 ZNF18P17022 549 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 TGM1P22735 817 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 SLC6A4P31645 630 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 KRT9P35527 623 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 COPB1P53618 953 aaKnown RBP14.86□□□□□ -0.03
UBE3B-206ENST00000536398 EOGTQ5NDL2 527 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 ADGRF1Q5T601 910 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 NADSYN1Q6IA69 706 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 RFWD3Q6PCD5 774 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 APTXQ7Z2E3 356 aaKnown RBP14.86□□□□□ -0.03
UBE3B-206ENST00000536398 AOPEPQ8N6M6 819 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 MDGA1Q8NFP4 955 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 PARD6AQ9NPB6 346 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 FAM207AQ9NSI2 230 aaPredicted RBP14.86□□□□□ -0.03
UBE3B-206ENST00000536398 LIMA1Q9UHB6 759 aaKnown RBP14.86□□□□□ -0.03
UBE3B-206ENST00000536398 XPO7Q9UIA9 1087 aaKnown RBP14.86□□□□□ -0.03
UBE3B-206ENST00000536398 RAB23Q9ULC3 237 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 SIK3Q9Y2K2 1263 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 RAD54BQ9Y620 910 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 GVINP1Q7Z2Y8 2422 aa14.86□□□□□ -0.03
UBE3B-206ENST00000536398 F8VZ95 297 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 CYBBP04839 570 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 ATP1A3P13637 1013 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 HOXD9P28356 352 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-206ENST00000536398 POLR2FP61218 127 aaKnown RBP14.85□□□□□ -0.03
UBE3B-206ENST00000536398 YWHAZP63104 245 aaKnown RBP14.85□□□□□ -0.03
UBE3B-206ENST00000536398 SPEM2Q0P670 501 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 HSF5Q4G112 596 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-206ENST00000536398 PREPLQ4J6C6 727 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-206ENST00000536398 PTPN20Q4JDL3 420 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 ANO6Q4KMQ2 910 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 FAM133BQ5BKY9 247 aaKnown RBP14.85□□□□□ -0.03
UBE3B-206ENST00000536398 OR6B2Q6IFH4 312 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 KIAA1211LQ6NV74 962 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 FAM183BPQ6ZVS7 135 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 NOP9Q86U38 636 aaKnown RBP14.85□□□□□ -0.03
UBE3B-206ENST00000536398 RASSF3Q86WH2 238 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 DEFB106AQ8N104 65 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 FRMD1Q8N878 549 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms