RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 TOP3BO95985 862 aaKnown RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 ZSCAN5DPP0CG00 497 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 ETS1P14921 441 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 JAK1P23458 1154 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 RRM1P23921 792 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 IDUAP35475 653 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 ETV3P41162 512 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 POLD2P49005 469 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 RAP1GDS1P52306 607 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 STAT2P52630 851 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 LBX1P52954 281 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 NR1H2P55055 460 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 P2RX3P56373 397 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 CHRNEQ04844 493 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 ZBTB17Q13105 803 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 SLC13A2Q13183 592 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 SMAD1Q15797 465 aaKnown RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 KIZQ2M2Z5 673 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 COBLL1Q53SF7 1204 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 EFHC1Q5JVL4 640 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 C10orf76Q5T2E6 689 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 MAP3K21Q5TCX8 1036 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 C6orf163Q5TEZ5 329 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 ATG9AQ7Z3C6 839 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 ZNF598Q86UK7 904 aaKnown RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 TRABD2AQ86V40 505 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 NIM1KQ8IY84 436 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 LILRA2Q8N149 483 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 FANCBQ8NB91 859 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 GLIS1Q8NBF1 620 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 LNX1Q8TBB1 728 aaPredicted RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 FAM110BQ8TC76 370 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 BORCS5Q969J3 196 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 RMDN1Q96DB5 314 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 OMA1Q96E52 524 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 VMP1Q96GC9 406 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 DMRTB1Q96MA1 342 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 RILPQ96NA2 401 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 PSKH2Q96QS6 385 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 CCDC28BQ9BUN5 200 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 TSSK1BQ9BXA7 367 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 TRIM9Q9C026 710 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 MCOLN1Q9GZU1 580 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 NEK6Q9HC98 313 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 TYW1Q9NV66 732 aaKnown RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 ADPRHL2Q9NX46 363 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 REV1Q9UBZ9 1251 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 POLHQ9Y253 713 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 SCINQ9Y6U3 715 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 C7orf72A4D263 438 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 NEURL1BA8MQ27 555 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 FAM155AB1AL88 458 aaPredicted RBP3.84□□□□□ -1.79
MCF2-210ENST00000536274 EYA2O00167 538 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 CYB561D2O14569 222 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 AXIN1O15169 862 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 KMOO15229 486 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 SPOPO43791 374 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 TNFAIP8O95379 198 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 NTSR2O95665 410 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 CALCAP01258 141 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 CPA3P15088 417 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 CBLP22681 906 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 FMO4P31512 558 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 CYP2C18P33260 490 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 COILP38432 576 aaPredicted RBP3.84□□□□□ -1.79
MCF2-210ENST00000536274 GRIA1P42261 906 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 PRMT2P55345 433 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 SH3BGRP55822 239 aaPredicted RBP3.84□□□□□ -1.79
MCF2-210ENST00000536274 KRT76Q01546 638 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 GCKRQ14397 625 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 ABCB5Q2M3G0 1257 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 TRMT5Q32P41 509 aaKnown RBP3.84□□□□□ -1.79
MCF2-210ENST00000536274 BBS9Q3SYG4 887 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 ZNF618Q5T7W0 954 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 NEK5Q6P3R8 708 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 KCTD1Q719H9 257 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 GALNT7Q86SF2 657 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 GPR180Q86V85 440 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 DGKHQ86XP1 1220 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 ARID3BQ8IVW6 561 aaPredicted RBP3.84□□□□□ -1.79
MCF2-210ENST00000536274 CCDC24Q8N4L8 307 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 AGBL3Q8NEM8 1001 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 ELMO1Q92556 727 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 PPP1R36Q96LQ0 422 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 NECTIN4Q96NY8 510 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 NT5C1BQ96P26 610 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 FAM111AQ96PZ2 611 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 FERMT1Q9BQL6 677 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 TRIM56Q9BRZ2 755 aaKnown RBP3.84□□□□□ -1.79
MCF2-210ENST00000536274 TARS2Q9BW92 718 aaKnown RBP3.84□□□□□ -1.79
MCF2-210ENST00000536274 TRIM55Q9BYV6 548 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 C20orf27Q9GZN8 174 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 CPVLQ9H3G5 476 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 RNPEPQ9H4A4 650 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 NARFLQ9H6Q4 476 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 MANSC1Q9H8J5 431 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 ARMT1Q9H993 441 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 VPS37BQ9H9H4 285 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 PARVGQ9HBI0 331 aa3.84□□□□□ -1.79
MCF2-210ENST00000536274 EPB41L4AQ9HCS5 686 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms