RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 PEX5P50542 639 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 TBX4P57082 545 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 SLC25A11Q02978 314 aaKnown RBP11.98□□□□□ -0.49
CDCA3-206ENST00000536241 SMTNL2Q2TAL5 461 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 BOLA3Q53S33 107 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 ATAT1Q5SQI0 421 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 ERMARDQ5T6L9 678 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 CCDC185Q8N715 623 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 PPM1EQ8WY54 764 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 ING5Q8WYH8 240 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 PABPC5Q96DU9 382 aaKnown RBP11.98□□□□□ -0.49
CDCA3-206ENST00000536241 NAPGQ99747 312 aaPredicted RBP11.98□□□□□ -0.49
CDCA3-206ENST00000536241 NCAPGQ9BPX3 1015 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 KLF16Q9BXK1 252 aaPredicted RBP11.98□□□□□ -0.49
CDCA3-206ENST00000536241 TASP1Q9H6P5 420 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 ANLNQ9NQW6 1124 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDCA3-206ENST00000536241 TLR6Q9Y2C9 796 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 CDH23Q9H251 3354 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 CCDC66A2RUB6 948 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 MIF4GDA9UHW6 222 aaKnown RBP11.97□□□□□ -0.49
CDCA3-206ENST00000536241 I6L893 689 aaPredicted RBP11.97□□□□□ -0.49
CDCA3-206ENST00000536241 KIF2AO00139 706 aaPredicted RBP11.97□□□□□ -0.49
CDCA3-206ENST00000536241 CTNNA1P35221 906 aaKnown RBP11.97□□□□□ -0.49
CDCA3-206ENST00000536241 KCNQ1P51787 676 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 COG7P83436 770 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 ZXDBP98169 803 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 ITIH3Q06033 890 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 COL19A1Q14993 1142 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 TRIP4Q15650 581 aaPredicted RBP11.97□□□□□ -0.49
CDCA3-206ENST00000536241 ARHGAP15Q53QZ3 475 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 ZFYVE27Q5T4F4 411 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 LRRC38Q5VT99 294 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 CES5AQ6NT32 575 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 CYP4V2Q6ZWL3 525 aaPredicted RBP11.97□□□□□ -0.49
CDCA3-206ENST00000536241 UBL4BQ8N7F7 174 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 ALG3Q92685 438 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 ACSF2Q96CM8 615 aaPredicted RBP11.97□□□□□ -0.49
CDCA3-206ENST00000536241 SLC39A13Q96H72 371 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 MSLNLQ96KJ4 702 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 FCRL2Q96LA5 508 aaPredicted RBP11.97□□□□□ -0.49
CDCA3-206ENST00000536241 ZSWIM3Q96MP5 696 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 GUCD1Q96NT3 240 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 PSMB7Q99436 277 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 TKTL2Q9H0I9 626 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 GPATCH2LQ9NWQ4 482 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 SMPD4Q9NXE4 827 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 FZD10Q9ULW2 581 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDCA3-206ENST00000536241 DENND4CQ5VZ89 1909 aa11.97□□□□□ -0.49
CDCA3-206ENST00000536241 TRAV19A0A0A6YYK7 116 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 PSTPIP1O43586 416 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 SRGAP2O75044 1071 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 OLFM2O95897 454 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 KRT7P08729 469 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 CEBPBP17676 345 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 FSHRP23945 695 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 CCR1P32246 355 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 CXCR5P32302 372 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 KPNA1P52294 538 aaPredicted RBP11.96□□□□□ -0.49
CDCA3-206ENST00000536241 RWDD2BP57060 319 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 CLUL1Q15846 466 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 CA9Q16790 459 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 ARL13BQ3SXY8 428 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 DNTTIP2Q5QJE6 756 aaKnown RBP11.96□□□□□ -0.49
CDCA3-206ENST00000536241 PAPD7Q5XG87 772 aaKnown RBP11.96□□□□□ -0.49
CDCA3-206ENST00000536241 CMTM8Q8IZV2 173 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 PYROXD2Q8N2H3 581 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 KCTD6Q8NC69 237 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 UBE2Q2Q8WVN8 375 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 RAPGEF5Q92565 580 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 HSPH1Q92598 858 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 WBP2Q969T9 261 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 RNF25Q96BH1 459 aaPredicted RBP11.96□□□□□ -0.49
CDCA3-206ENST00000536241 SNRNP25Q9BV90 132 aaKnown RBP11.96□□□□□ -0.49
CDCA3-206ENST00000536241 SMG9Q9H0W8 520 aaKnown RBP11.96□□□□□ -0.49
CDCA3-206ENST00000536241 SLITRK6Q9H5Y7 841 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 KLHL11Q9NVR0 708 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 MTMR10Q9NXD2 777 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 ARHGEF38Q9NXL2 777 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 HBS1LQ9Y450 684 aaKnown RBP11.96□□□□□ -0.49
CDCA3-206ENST00000536241 TRANK1O15050 2925 aa11.96□□□□□ -0.49
CDCA3-206ENST00000536241 C2orf16Q68DN1 1984 aa11.96□□□□□ -0.5
CDCA3-206ENST00000536241 OBSL1O75147 1896 aa11.96□□□□□ -0.5
CDCA3-206ENST00000536241 KCNU1A8MYU2 1149 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 PI4K2BG5E9Z4 385 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 KCNK3O14649 394 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 STC2O76061 302 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 ZRANB2O95218 330 aaKnown RBP eCLIP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 MOCS2O96007 188 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 CKMP06732 381 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 IRF1P10914 325 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 SLC2A3P11169 496 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 PYGMP11217 842 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 PFKLP17858 780 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 KDELR1P24390 212 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 DDX6P26196 483 aaKnown RBP eCLIP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 SLC7A9P82251 487 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 RING1Q06587 406 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 ZNF211Q13398 564 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms