RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 TBX4P57082 545 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 SNX16P57768 344 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 RNASE9P60153 205 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 RING1Q06587 406 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 NNTQ13423 1086 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 NADSYN1Q6IA69 706 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 ACAD10Q6JQN1 1059 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 FSTL4Q6MZW2 842 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 TPGS1Q6ZTW0 290 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 SFTPA1Q8IWL2 248 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 SUGP1Q8IWZ8 645 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 EZH1Q92800 747 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 SERPINB11Q96P15 392 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 TRIM62Q9BVG3 475 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 OSBPL6Q9BZF3 934 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 TRIM5Q9C035 493 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 METTL5Q9NRN9 209 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 RBM12Q9NTZ6 932 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 XPO7Q9UIA9 1087 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 TLR6Q9Y2C9 796 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 LUC7L2Q9Y383 392 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 SIT1Q9Y3P8 196 aa11.79□□□□□ -0.52
TNFRSF1A-208ENST00000536194 ANTXRLA6NF34 631 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 GFRA2O00451 464 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 TRDMT1O14717 391 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 HOXC11O43248 304 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 ADH1CP00326 375 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 SERPING1P05155 500 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 HNRNPH3P31942 346 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 NOS2P35228 1153 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 MATKP42679 507 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 SLC6A11P48066 632 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 GALK1P51570 392 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 SGSHP51688 502 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 ZNF75DP51815 510 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 TBX2Q13207 712 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 CCINQ13939 588 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 ARID5BQ14865 1188 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 TMEM196Q5HYL7 178 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 WDR59Q6PJI9 974 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 BNIPLQ7Z465 357 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 ETFBKMTQ8IXQ9 262 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 MCOLN2Q8IZK6 566 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 PHTF2Q8N3S3 785 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 EMC1Q8N766 993 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 MSANTD4Q8NCY6 345 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 JOSD2Q8TAC2 188 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 NT5C3BQ969T7 300 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 CLDN23Q96B33 292 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 MYEOVQ96EZ4 313 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 NPY6RQ99463 290 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 DNAJC7Q99615 494 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 DCLK3Q9C098 648 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 NUCKS1Q9H1E3 243 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 ADAM22Q9P0K1 906 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 MARK1Q9P0L2 795 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 ARHGAP20Q9P2F6 1191 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 STOML2Q9UJZ1 356 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 ZDBF2Q9HCK1 2354 aa11.78□□□□□ -0.52
TNFRSF1A-208ENST00000536194 GOLGA6L7A0A1B0GV03 622 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 TMCO5BA8MYB1 307 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 NEDD8-MDP1E9PL57 170 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 LATS1O95835 1130 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 EGFP01133 1207 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 PENKP01210 267 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 CALB1P05937 261 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 CHRM1P11229 460 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 SLC6A4P31645 630 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 HARS2P49590 506 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 ATXN1P54253 815 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 ADKP55263 362 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 CDK17Q00537 523 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 GAD2Q05329 585 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 C1QBPQ07021 282 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 NR1H3Q13133 447 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 TRIM14Q14142 442 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 GAS6Q14393 721 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 ANO4Q32M45 955 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 RAB6CQ53S08 254 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 TDRD12Q587J7 1177 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 FAM133BQ5BKY9 247 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 ZC3H12AQ5D1E8 599 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 FYB2Q5VWT5 728 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 C1orf228Q6PIY5 440 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 Q6ZS52 159 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 ARCQ7LC44 396 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 CPXM2Q8N436 756 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 NAT16Q8N8M0 369 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 CD101Q93033 1021 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 BHMTQ93088 406 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 CFAP57Q96MR6 1250 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 TBCBQ99426 244 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 NELL2Q99435 816 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 P2RY13Q9BPV8 354 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 BBS2Q9BXC9 721 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 RAB6CQ9H0N0 254 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 FAM204AQ9H8W3 233 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 ANLNQ9NQW6 1124 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 PIGVQ9NUD9 493 aa11.77□□□□□ -0.53
TNFRSF1A-208ENST00000536194 DDIT4Q9NX09 232 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms