RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 DHX16O60231 1041 aaKnown RBP4.44□□□□□ -1.7
YBX3-205ENST00000536107 ATG13O75143 517 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 SURF6O75683 361 aaKnown RBP4.44□□□□□ -1.7
YBX3-205ENST00000536107 ALDH2P05091 517 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 GNAI3P08754 354 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 HLA-EP13747 358 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 TCF7P36402 384 aaPredicted RBP4.44□□□□□ -1.7
YBX3-205ENST00000536107 SLC11A1P49279 550 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 GLUD2P49448 558 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 EPHA5P54756 1037 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 GFPT1Q06210 699 aaPredicted RBP4.44□□□□□ -1.7
YBX3-205ENST00000536107 TOB2Q14106 344 aaPredicted RBP4.44□□□□□ -1.7
YBX3-205ENST00000536107 PLCB4Q15147 1175 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 PPP2R5EQ16537 467 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 PRSS53Q2L4Q9 553 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 WDR72Q3MJ13 1102 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 PABPC1LQ4VXU2 614 aaKnown RBP4.44□□□□□ -1.7
YBX3-205ENST00000536107 DENND5AQ6IQ26 1287 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 C1orf228Q6PIY5 440 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 BTNL9Q6UXG8 535 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 RHOUQ7L0Q8 258 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.44□□□□□ -1.7
YBX3-205ENST00000536107 C11orf74Q86VG3 221 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 VRK3Q8IV63 474 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 YAF2Q8IY57 180 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 TTC8Q8TAM2 541 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 SETD7Q8WTS6 366 aaKnown RBP4.44□□□□□ -1.7
YBX3-205ENST00000536107 TRAPPC12Q8WVT3 735 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 ELSPBP1Q96BH3 223 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 MED8Q96G25 268 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 TMEM176AQ96HP8 235 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 PDCD2LQ9BRP1 358 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 VN1R3Q9BXE9 311 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.44□□□□□ -1.7
YBX3-205ENST00000536107 OR10A2Q9H208 303 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 SMARCAD1Q9H4L7 1026 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 ZFP14Q9HCL3 533 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 FSCN3Q9NQT6 498 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 MRPL11Q9Y3B7 192 aaKnown RBP4.44□□□□□ -1.7
YBX3-205ENST00000536107 COX11Q9Y6N1 276 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 ABCB11O95342 1321 aa4.44□□□□□ -1.7
YBX3-205ENST00000536107 DENND4AQ7Z401 1863 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 NAV1Q8NEY1 1877 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 SMIM35A0A1B0GVV1 85 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 SLC38A8A6NNN8 435 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 ACOT7O00154 380 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 PSMC3P17980 439 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 RPL17P18621 184 aaKnown RBP4.43□□□□□ -1.7
YBX3-205ENST00000536107 SOX9P48436 509 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 SCNN1GP51170 649 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 DGKEP52429 567 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 HGFACQ04756 655 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 CCDC173Q0VFZ6 552 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 EIF4HQ15056 248 aaKnown RBP4.43□□□□□ -1.7
YBX3-205ENST00000536107 PGM5Q15124 567 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 PON2Q15165 354 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 KIZQ2M2Z5 673 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 SBK1Q52WX2 424 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 NOMO2Q5JPE7 1267 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 ARHGAP40Q5TG30 622 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 TRIM68Q6AZZ1 485 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 PDXDC1Q6P996 788 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 CXXC5Q7LFL8 322 aaKnown RBP4.43□□□□□ -1.7
YBX3-205ENST00000536107 FAM228AQ86W67 206 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 ZNF280BQ86YH2 543 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 WDR63Q8IWG1 891 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 GALNT15Q8N3T1 639 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 SYNPOQ8N3V7 929 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 CAMKK1Q8N5S9 505 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 URGCPQ8TCY9 931 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 MSANTD3Q96H12 275 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 AZI2Q9H6S1 392 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 C8orf33Q9H7E9 229 aaPredicted RBP4.43□□□□□ -1.7
YBX3-205ENST00000536107 SLC39A2Q9NP94 309 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 TBC1D13Q9NVG8 400 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 GDE1Q9NZC3 331 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 DNAJB4Q9UDY4 337 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 EVLQ9UI08 416 aaPredicted RBP4.43□□□□□ -1.7
YBX3-205ENST00000536107 PRG3Q9Y2Y8 225 aaPredicted RBP4.43□□□□□ -1.7
YBX3-205ENST00000536107 SH3BP1Q9Y3L3 701 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 KDM3AQ9Y4C1 1321 aa4.43□□□□□ -1.7
YBX3-205ENST00000536107 GREB1Q4ZG55 1949 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 CACNA1FO60840 1977 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 SHROOM3Q8TF72 1996 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 PNMA6EA0A0J9YXQ4 647 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 BLACEA4D250 179 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 GRID2IPA4D2P6 1211 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 PLK4O00444 970 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 FIBPO43427 364 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 TLX3O43711 291 aaPredicted RBP4.42□□□□□ -1.7
YBX3-205ENST00000536107 NMT2O60551 498 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 APBB3O95704 486 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 SOD2P04179 222 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 GNAI2P04899 355 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 HNRNPA1P09651 372 aaKnown RBP eCLIP4.42□□□□□ -1.7
YBX3-205ENST00000536107 CD59P13987 128 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 HOXA13P31271 388 aaPredicted RBP4.42□□□□□ -1.7
YBX3-205ENST00000536107 ADD2P35612 726 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 CRYBB1P53674 252 aaPredicted RBP4.42□□□□□ -1.7
YBX3-205ENST00000536107 GFRA1P56159 465 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms