RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 DDI1Q8WTU0 396 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 TWNKQ96RR1 684 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 NUP58Q9BVL2 599 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 GAREM1Q9H706 876 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 DMAC2Q9NW81 257 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 USP36Q9P275 1121 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 THAP10Q9P2Z0 257 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PCDHA7Q9UN72 937 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 AKAP13Q12802 2813 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ZFYVE26Q68DK2 2539 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SPEGQ15772 3267 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 HHLA1C9JL84 531 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 BCAT2O15382 392 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CILPO75339 1184 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 GJB3O75712 270 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 F13A1P00488 732 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PENKP01210 267 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SLFN14P0C7P3 912 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 NR2F2P24468 414 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 GCLMP48507 274 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 TPMTP51580 245 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ZNF234Q14588 700 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 GEN1Q17RS7 908 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ZNF394Q53GI3 561 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 FYB2Q5VWT5 728 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ATL3Q6DD88 541 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 DENND1CQ8IV53 801 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 TMEM174Q8WUU8 243 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 DNASE2BQ8WZ79 361 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 HEXIM2Q96MH2 286 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 DUSP16Q9BY84 665 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 MKRN2Q9H000 416 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 KCTD10Q9H3F6 313 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ITM2CQ9NQX7 267 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 TM7SF3Q9NS93 570 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ELOVL2Q9NXB9 296 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 MARCH2Q9P0N8 246 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 BAHCC1Q9P281 2608 aa13.6□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SLC12A8A0AV02 714 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 MAPK13O15264 365 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ZZEF1O43149 2961 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 FLRT2O43155 660 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 KLRC4O43908 158 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 MYL1P05976 194 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 TRIM49P0CI25 452 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 TRIM49CP0CI26 452 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ZSCAN22P10073 491 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 HOXB3P14651 431 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 RPL13P26373 211 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SUZ12Q15022 739 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 TEAD4Q15561 434 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PPP1R26Q5T8A7 1209 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 FAM124AQ86V42 546 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 HSCBQ8IWL3 235 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 FAM186BQ8IYM0 893 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ZNF276Q8N554 614 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 TAS1R2Q8TE23 839 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PLD4Q96BZ4 506 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PAGE5Q96GU1 130 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CDC6Q99741 560 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SLC2A11Q9BYW1 496 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 USP25Q9UHP3 1055 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 EIF2B4Q9UI10 523 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 FBXO10Q9UK96 956 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PCOLCE2Q9UKZ9 415 aa13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 AGO1Q9UL18 857 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-207ENST00000535958 METTL12A8MUP2 240 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TIMM44O43615 452 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ACTN4O43707 911 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ZNF883P0CG24 379 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 PSMC2P35998 433 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 HARS2P49590 506 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 AFF3P51826 1226 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 YWHAGP61981 247 aaKnown RBP eCLIP13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 FNDC3BQ53EP0 1204 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 MPPE1Q53F39 396 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 C19orf48Q6RUI8 117 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SCD5Q86SK9 330 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CPXM2Q8N436 756 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 RHBDD1Q8TEB9 315 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 RNF139Q8WU17 664 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 PCED1AQ9H1Q7 454 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 LHX5Q9H2C1 402 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 APOBEC3GQ9HC16 384 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TMEM8AQ9HCN3 771 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 OLA1Q9NTK5 396 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 PLA2G4CQ9UP65 541 aa13.58□□□□□ -0.24
TNFRSF1A-207ENST00000535958 EIF4E1BA6NMX2 242 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 GOLGA8CPA6NN73 597 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 KCNJ18B7U540 433 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 STX10O60499 249 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 KLKB1P03952 638 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 PRKCHP24723 683 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 MXI1P50539 228 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ZNF445P59923 1031 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 HLA-BQ31612 363 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 INAVAQ3KP66 663 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TTC31Q49AM3 519 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 KRT39Q6A163 491 aa13.57□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CCNI2Q6ZMN8 369 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms